Fulvivirga ligni: LVD16_06130
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Entry
LVD16_06130 CDS
T09288
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
flw
Fulvivirga ligni
Pathway
flw00300
Lysine biosynthesis
flw00470
D-Amino acid metabolism
flw01100
Metabolic pathways
flw01110
Biosynthesis of secondary metabolites
flw01120
Microbial metabolism in diverse environments
flw01230
Biosynthesis of amino acids
Module
flw_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LVD16_06130 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LVD16_06130 (dapF)
Enzymes [BR:
flw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LVD16_06130 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
UII22801
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Position
complement(1374054..1374839)
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AA seq
261 aa
AA seq
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MKEINFYKYQATGNDFILIDNRQAKFELSKEEISFLCDRKFGIGSDGLMLIQDHADYDFE
LIFYNPDSSQSLCGNGSRCAVNFAKFLGIIDSKTNFLAYDGGHEAEILANNEVRLKMADV
QNVRLMSDGIFVDTGSPHLIKYVINIDTYRVYDQGKAIRNGGLFKEAGVNVNFVQVTGEN
QIFVRTYERGVENETLSCGTGVTAAALASSTKDLQSPVKVNTMGGNLSVDFIKNEDNSFS
EVYLTGPAKQVFQGSLELKNI
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagattaatttttataaatatcaggccacaggcaatgatttcatacttatagac
aatagacaagcaaaatttgaactctctaaagaggaaatctcctttttgtgcgatcgtaaa
tttggaataggttctgacggcctcatgcttatacaagaccatgcagactacgactttgag
ctcatattttacaacccagacagcagccaaagtttatgcggcaatggtagtcgctgtgct
gtaaatttcgccaagtttttaggcataattgattcaaagaccaatttcctggcatatgat
ggtggccatgaagcagaaatattggcaaacaatgaagtgcgtttaaaaatggccgacgta
caaaatgtcaggttaatgtctgatggtatatttgttgatacaggttcaccacatctgatc
aagtatgtgattaacattgatacttatagggtgtatgatcaaggaaaagccataagaaat
ggcggtctgtttaaagaagcaggggtaaatgttaatttcgtgcaggttacaggtgagaac
cagatctttgtaagaacctatgagagaggcgttgaaaacgaaactctttcttgcggcact
ggtgttacagctgccgctttggcatctagtactaaagatttacaatctccagtgaaagtc
aacactatgggcggcaacctctctgttgatttcataaaaaatgaagacaatagctttagc
gaagtatatctgactggtccggccaagcaggttttccagggatcattagaattgaagaat
atttag
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