Fulvivirga ligni: LVD16_06140
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Entry
LVD16_06140 CDS
T09288
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
flw
Fulvivirga ligni
Pathway
flw00220
Arginine biosynthesis
flw00240
Pyrimidine metabolism
flw00250
Alanine, aspartate and glutamate metabolism
flw01100
Metabolic pathways
flw01110
Biosynthesis of secondary metabolites
flw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LVD16_06140 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LVD16_06140 (carB)
00220 Arginine biosynthesis
LVD16_06140 (carB)
Enzymes [BR:
flw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LVD16_06140 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
GARS_A
ATPgrasp_Ter
ATP-grasp_5
Epimerase
RimK
Motif
Other DBs
NCBI-ProteinID:
UII22803
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Position
complement(1375217..1378030)
Genome browser
AA seq
937 aa
AA seq
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MPRDRSIRSVLIIGSGPIVIGQACEFDYSGSQASRSLREEGIEVILINSNPATIMTDKVT
ADHIYLKPLTKQSIREILQKHNIDAVLPTMGGQTALNLAIDCDKAGIWDHFGVKIIGVDI
NAIETTEDREKFRLKMNELGVNVCKGETASSFLQGKEIAQEIGFPLVIRPSFTLGGSGGG
FVNSADEFEQALTHGLHTSPIHEVLIEQSILGWKEYEVELLRDNKGNIIIICSIENFDPM
GVHTGDSITVAPAMTLPDTVYQEMRNLSKLMMNGIGMFAGGCNVQFAVNPDDDSIIGIEI
NPRVSRSSALASKATGYPIAKIAAKLAIGYNLDELDNAITGTTSAFFEPALDYVIVKIPR
WNFDKFQGSDRRLGLSMKSVGEVMGIGRNFQEALQKACQSLEIKRNGLGADGKELKDQKA
ILESLEHPSWNRLFHVYDAFKLGVSFKTIEKLTKIDKWFLHQIEEFILIENEIEKYDIDT
IPFELFKTAKEKGYADRQLGHLMGCLESEVFNKRKEIGLNRVYKLVDTCAAEFEAKTPYY
YSTFDDENESIVSDKKKIVVLGSGPNRIGQGIEFDYSCVHGILAAKECGYETIMINCNPE
TVSTDFDVADKLYFEPVFWEHIYEIILHEKPEGVIVQLGGQTALKLAEKLEKYGIKILGT
NFKSLDLAEDRGSFSNILKDNGIPYPEFGVAEDAETAIELSKDIGFPLLVRPSYVLGGQS
MKIVINETELESHIVDILREIPGNKVLLDHFLDGAIEAEADAICDGENVHIIGIMQHIEP
AGIHSGDSYAVLPPYNLGDLVVAQIEAYTKKIALALNTVGLINIQFAIKDDKVYIIEANP
RASRTVPFICKAYDEPYVNYAVKVMLGEKKVTDFTFNPKKQGYAIKEPVFSFAKFPKVNK
ELGPEMKSTGEAIYFIDDLMDDYFIKIYSERNLYLSK
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgccaagagataggagcatcaggtcagttttaattatcggaagcggacctattgttatt
ggacaagcatgtgaatttgactattcaggatcacaagcttcacgttcacttagagaagaa
ggtatagaagtcattttgatcaattccaacccggctacgatcatgacagacaaggtcacc
gcagaccatatatacctcaagccactcaccaaacaatccattagagaaatcctgcaaaag
cataatattgatgctgttctacctaccatgggtggacaaacagcattaaaccttgctata
gattgcgataaagcaggaatctgggatcattttggagttaaaatcatcggagttgatatc
aacgcgatcgaaacaactgaagatcgagagaaattccgtctgaaaatgaacgagctaggt
gtaaatgtttgtaaaggagaaaccgcttcttctttcctacaagggaaagagatagctcag
gaaattggtttccctctggttatcagaccttcatttacattaggtggttcaggtggtgga
tttgtaaacagtgcggatgaattcgagcaagcactgacccacggccttcacacctctcct
attcatgaggttttgatagagcaaagtatcttaggatggaaagaatatgaggtggagctc
cttagagataacaaaggaaacatcatcattatctgttctattgaaaactttgatcctatg
ggggttcatactggagattcaatcacagtagcacctgccatgactcttcctgacactgtg
tatcaggaaatgaggaacctttcaaaattgatgatgaacggaatcgggatgtttgctggt
ggttgtaacgtacagtttgcggttaaccctgatgacgattctatcattggtatcgagatt
aaccctagggtttcaagatcatcagctcttgcatctaaggctacgggttatcctattgca
aaaatagcagcgaaattagctattggttataaccttgatgagcttgataacgccattact
ggtactacttcagcattcttcgagcctgcacttgactatgtaattgttaagatacctcgt
tggaattttgataaattccagggttcagatagaagattaggtctttctatgaaatccgta
ggtgaggtaatgggtatcggtagaaacttccaggaagcacttcagaaggcttgtcagtct
ttagaaatcaagagaaatggtcttggtgctgatggtaaagaacttaaggatcaaaaagct
attttagaaagccttgagcaccctagctggaacagattgttccatgtttatgatgccttc
aaattaggagtttccttcaaaaccattgaaaaactcactaaaatagacaagtggttcctt
caccaaattgaagaatttattctcattgaaaatgagattgaaaaatatgatattgatact
atccctttcgagctgtttaaaacagcaaaagaaaaaggatatgctgatagacagctaggt
catttaatgggctgccttgaaagtgaagtattcaataagagaaaagaaataggcctaaac
agagtgtacaagttagtagatacttgtgcggccgagtttgaggctaaaacaccatactat
tactcaactttcgacgatgaaaatgagtcaatagttagtgacaaaaagaaaattgtagta
ctaggttctggtcctaaccgaattggtcagggtatagaatttgactactcttgcgtgcac
ggaatccttgccgctaaagaatgtggctatgaaactataatgattaactgtaaccctgaa
acagtttctactgatttcgatgtggcagataaattatacttcgagccagtattctgggag
catatttatgagattatacttcatgaaaaacctgagggagtaatcgttcagcttggaggt
cagacagcacttaaactggctgagaaactagagaagtatggcattaaaatcttaggaacc
aactttaagtctctggatcttgcagaagacagaggtagcttctctaacattttgaaagat
aatggcattccttaccctgagtttggtgtagctgaagatgctgaaactgctattgagctt
tcaaaagatattggattccctcttttggtaagaccatcttacgttcttggtggtcagagc
atgaaaattgtgatcaatgaaactgagctagaatctcatattgttgatattcttagagaa
attcctggaaacaaagtacttctggatcatttcttagatggagcaatagaagcagaagca
gatgccatttgtgatggagaaaatgtacacatcatcggtatcatgcagcatatagagccc
gcaggtattcactctggagactcttacgcagtacttcccccatacaatttgggagactta
gtagtagcgcagatagaggcttacactaagaaaattgctttagctcttaatacagtaggt
ttaattaacatacagtttgccattaaagatgacaaggtatatatcatagaggctaaccca
agggcgtctcgtacggtacctttcatttgtaaagcatatgacgaaccttatgtaaactac
gccgttaaagtaatgctaggggagaaaaaagtaactgactttactttcaaccctaaaaaa
caagggtatgccataaaagaaccggtattctcatttgccaaattccctaaagtaaataag
gaattaggaccagaaatgaaatctacaggtgaggcaatctattttatagatgatcttatg
gacgattacttcataaagatctactcagagagaaacctctacttgagtaagtaa
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