Fulvivirga ligni: LVD16_06865
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Entry
LVD16_06865 CDS
T09288
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
flw
Fulvivirga ligni
Pathway
flw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LVD16_06865 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flw03400
]
LVD16_06865 (recO)
DNA repair and recombination proteins [BR:
flw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LVD16_06865 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LVD16_06865 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
DUF5669
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
UII22942
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All DBs
Position
1550757..1551419
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AA seq
220 aa
AA seq
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MLHKTQGVVFKYFKYRDTSIIVKIFTREFGIQTYIVNGVRSKSARSRIALYQPLTLLDLV
VYRKNGAEINRISEVKCNHPFQTLSTDIKKTSIAIFLAEILYKCVKEEEEDVSDLFDFIY
HSIEMFDHINTGYENFHLQFLLKLARYLGFGLDSPEEHFLTVDPEELNILKTLVYNSYEE
GIKISNAQRRALLDQIIRFYKVHVETLKEINSLQVLKEIL
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgcttcacaaaactcaaggcgtagtttttaaatattttaaatatagagatacctctata
atcgttaaaatattcaccagagagtttggcattcaaacatatatagttaatggtgtgagg
agtaaatctgcccgaagtagaatagctctttatcagccactgacactattagatttagta
gtttatagaaaaaacggagcggagataaaccgtatttctgaggtgaaatgtaatcatcca
ttccaaacgctctccacggatatcaagaaaacctctatagctatttttttggcagaaatt
ttgtataaatgcgtgaaagaggaagaagaagatgtttctgatctttttgattttatatac
cacagtatagaaatgtttgatcatataaatactggttatgaaaactttcatctccagttt
ttattgaagttggcgcgctatctgggcttcggattagattctcccgaagagcactttctt
acagtggatcctgaagaattaaatattcttaaaacactggtttacaattcttatgaggag
ggaataaagatatcaaatgcccaacgaagagcattgttagaccaaataataagattttat
aaggtgcatgtagagacactgaaagaaattaattcccttcaggttttgaaagaaatctta
taa
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