Fulvivirga ligni: LVD16_07020
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Entry
LVD16_07020 CDS
T09288
Symbol
rpsC
Name
(GenBank) 30S ribosomal protein S3
KO
K02982
small subunit ribosomal protein S3
Organism
flw
Fulvivirga ligni
Pathway
flw03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LVD16_07020 (rpsC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
flw03011
]
LVD16_07020 (rpsC)
Ribosome [BR:
flw03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LVD16_07020 (rpsC)
Bacteria
LVD16_07020 (rpsC)
Archaea
LVD16_07020 (rpsC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
VAR1
KH_KhpA-B
Ig_Shg
Motif
Other DBs
NCBI-ProteinID:
UII22973
LinkDB
All DBs
Position
1579258..1579992
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AA seq
244 aa
AA seq
DB search
MGQKVNPVAFRLGIVKGWDSSWYGGKDFSDKLVEDHNIRNYIAARIPKGGISKVVIERTL
KRITLTVHTARPGVVIGKGGAEVDKIKEELKKLTGKDVQINIFEVKRPELDAKLVGESIA
QQLQARISYRRAMKQAIASAMRVGAQGIKIKVSGRLGGAEMARTEQYKDGRIPLHTLRAD
IDYAISEASTVYGKIGIKVWIFKGEVYGKRDLSPNVGLGNSGSGNSGRGGRKRGGDGPKR
RRNK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaaagttaaccctgtagctttcagacttggtattgttaaaggttgggattcc
agctggtatggtggcaaggacttttctgataaattagtagaagatcacaacatcagaaac
tatatagcagctcgtataccaaaaggcggtatttctaaagtagtaatagaaagaacactt
aaaagaatcactttaacagtacacacggctcgtccaggtgttgttatcggtaaaggtggt
gctgaggtagataagattaaagaagagttaaagaaattgacaggtaaggatgttcaaatt
aacatcttcgaagttaagagacctgaactagatgctaaactagtaggtgaatctatcgct
cagcaattacaagcacgtatttcttacagaagagctatgaagcaagctattgcttctgcc
atgagagtaggtgctcagggaatcaaaatcaaagtttctggtcgtttaggtggcgcagag
atggcacgtactgagcagtacaaagatggtcgtattccattgcacacattaagagcagat
atcgattacgctatcagcgaagcaagcactgtttacggtaagatcggtatcaaagtatgg
atcttcaaaggtgaggtttacggtaaaagagatctttctcctaacgtaggattaggtaat
tcaggatctggaaactctggcagaggtggcagaaaaagaggtggagacggtcctaagaga
agaagaaataaatag
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