Fulvivirga ligni: LVD16_07820
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Entry
LVD16_07820 CDS
T09288
Symbol
scpA
Name
(GenBank) methylmalonyl-CoA mutase
KO
K01847
methylmalonyl-CoA mutase [EC:
5.4.99.2
]
Organism
flw
Fulvivirga ligni
Pathway
flw00280
Valine, leucine and isoleucine degradation
flw00630
Glyoxylate and dicarboxylate metabolism
flw00640
Propanoate metabolism
flw00720
Other carbon fixation pathways
flw01100
Metabolic pathways
flw01120
Microbial metabolism in diverse environments
flw01200
Carbon metabolism
flw04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LVD16_07820 (scpA)
00640 Propanoate metabolism
LVD16_07820 (scpA)
09102 Energy metabolism
00720 Other carbon fixation pathways
LVD16_07820 (scpA)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LVD16_07820 (scpA)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
LVD16_07820 (scpA)
Enzymes [BR:
flw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.2 methylmalonyl-CoA mutase
LVD16_07820 (scpA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MM_CoA_mutase
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UII23131
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Position
complement(1734285..1736414)
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AA seq
709 aa
AA seq
DB search
MKPDFDKIKYNQFKPEAKDLSNQPTWQSAEKIEVKSGYSEADFKTLEHTNYSAGIPPYLR
GPYSTMYAGRPWTIRQYAGFSTAEESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRV
TGDVGKAGVAIDSILDMKVLFDQIPLDKMSVSMTMNGAVIPIMAFYIAAAEEQGVKKEDL
SGTIQNDILKEFMVRNTYIYPPLPSMKIIADIFEYTSQNMPRFNSISISGYHMQEAGATA
DIELAYTLADGLEYIRAGIKAGLDIDDFAPRLSFFWAIGMNHFMEIAKMRAGRLLWAKLV
KQFNPKNDKSLALRTHCQTSGWSLTEQDPYNNVARTCTEALAAALGHTQSLHTNALDEAI
ALPTDFSARIARNTQLYLQKETNITKVVDPWGGSYYVESLTDELVQKAWSLIEEVEELGG
MAKAIESGLPKMRIEEAAARKQARIDSGKDIIVGVNKYQTDEEPDFDILEVDNTKVREQQ
IKRLEELKANRDKEKVAAALERISRIASGEEKGNLLEAAVVAARERASLGEISDAMEKEF
GRHKATIRSISGVYSEEAKMDSNFKEAKALSDQFAELEGRRPRIMVAKMGQDGHDRGAKV
IATSFADLGFDVDIGPLFQTPEEVARQATENDVHVIGASSLAAGHKTLIPELIQSLKNLG
REDIMVIAGGVIPPKDYDFLYEAGVAGVFGPGTVIAKAAKDILNKLLEE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagatttcgataaaataaaatataaccagtttaagcctgaagcgaaagatctt
tcaaatcagcccacctggcaatcagctgaaaaaatagaggtaaaatcaggttattcagaa
gctgattttaaaacactggaacatactaattatagtgcaggcattccgccttatttaaga
ggaccatacagtactatgtacgcaggacggccctggaccattcgtcagtatgccggtttt
tctaccgccgaagaatctaatgccttttacagacgaaacttggccgcgggtcaaaaaggt
ctgtctgtagcctttgatcttgccacacaccgagggtatgactcagaccatccgcgagta
accggagatgtgggcaaagcgggagtagcaatagattcaatcctggatatgaaggtgtta
tttgaccaaataccactggataaaatgtctgtttctatgactatgaacggtgctgtaatt
ccaattatggccttttacatagcagctgcagaagagcaaggggtaaaaaaggaggactta
agcggtactattcaaaatgatatcttaaaggagtttatggtgaggaacacctacatctac
cctcctttgccatccatgaagattatcgctgacatatttgaatatacttctcagaatatg
ccacgctttaactccatcagtatcagcggctaccacatgcaggaagctggtgccactgct
gatattgagctagcctatacccttgccgatggattggagtatattcgagcagggataaaa
gcaggattagatattgatgattttgctccccgactatcctttttctgggctatcggtatg
aatcattttatggagatagccaagatgagggctggcagattactatgggcaaaactcgta
aagcagtttaatcctaaaaatgacaaatcattagcacttcgcacgcattgccaaacctct
ggttggagcttaacagaacaagatccatataacaacgtggcaagaacctgcactgaagct
ttagccgcagcactaggacacacacagtctttacatacgaacgcccttgatgaagcaata
gctcttcccacagatttctctgcgcggatagctaggaacacgcagctttaccttcaaaag
gaaaccaatattactaaggtggttgatccctggggtggctcatattatgtagaaagcctc
acagatgagttagttcagaaggcttggtctttaatagaagaggtggaagagttaggaggt
atggccaaagctattgaaagtggccttcctaaaatgaggattgaagaggcagctgcaaga
aagcaggctagaatagattcagggaaagacataatagtaggtgtaaataaataccaaact
gatgaagaacctgatttcgacatattggaagtagataacaccaaagttcgtgagcagcag
atcaaaagattagaggagcttaaagcgaacagggataaggaaaaggtggccgctgcatta
gagagaattagcagaatagcttcaggagaagagaaaggcaatttactggaagctgcggtt
gttgctgctagagaaagagcctcattaggtgagatatctgatgctatggaaaaagaattt
ggaagacacaaagccaccatcagatcaatttcaggcgtatattcagaagaagcaaaaatg
gatagcaactttaaagaagctaaggcactttcagatcagtttgctgagctggaaggaaga
agacccaggattatggtagccaaaatgggccaagacggacacgacagaggtgctaaggta
atagccacaagctttgcagatctgggctttgacgtagacattggaccattattccaaaca
cctgaagaagtggccagacaagccactgagaatgatgtgcatgtgataggtgcttcaagc
ctggcagcagggcacaaaacgttgatccctgaactcatccagtctcttaaaaatctgggt
agagaagatatcatggtaatagccggtggcgtaatacctccaaaagattatgactttcta
tatgaagcaggggttgctggtgtatttggtccgggcactgttatagccaaggcagccaag
gatatactcaacaaattgcttgaagaatag
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