Fulvivirga ligni: LVD16_08420
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Entry
LVD16_08420 CDS
T09288
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
flw
Fulvivirga ligni
Pathway
flw00541
Biosynthesis of various nucleotide sugars
flw01100
Metabolic pathways
flw01250
Biosynthesis of nucleotide sugars
Module
flw_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LVD16_08420 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
flw01005
]
LVD16_08420 (kdsB)
Enzymes [BR:
flw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
LVD16_08420 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
flw01005
]
Lipid A
LVD16_08420 (kdsB)
BRITE hierarchy
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Motif
Other DBs
NCBI-ProteinID:
UII23250
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Position
complement(1882537..1883274)
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AA seq
245 aa
AA seq
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MKILGIIPARYGSTRFPAKALADIGGKTMVRRVYEQAKKASMLSEVVVATDHEAIYEEII
SFGGEVVMTSEDHQSGTDRCYEALQQQGSTYDYVINIQGDEPFIAPEQINLVAEMLDGET
QLGTLIKKIDSSEDVFNPNVVKVIFNNTKQAIYFSRTPLPYNRNHEKDDWLNQHSYYRHI
GIYAYRTDVLEQITQLGVSSLEKAESLEQLRWIENGYAIQVAETSYDSIGIDTPEDLEKL
KPFLS
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaagatactgggaattattccagcaaggtatggatccacccgctttccagccaaggca
ttagccgatattggtggtaaaacgatggtacgcagggtttacgaacaagctaagaaggct
tctatgctcagtgaagtggtggtagctacagatcatgaagctatttatgaagagataata
agctttggtggtgaagtagtcatgacctcagaagaccatcagagtggtacggatagatgt
tacgaagcccttcagcaacaaggctctacgtatgactatgtcattaacattcaaggtgat
gagccttttatagcacctgaacagatcaatttggtagctgaaatgttagatggagaaact
cagctggggacacttattaagaaaatagacagctctgaagatgtatttaaccctaacgtg
gtaaaagtgatcttcaacaatactaaacaagccatatatttcagcagaactcctctacca
tacaacaggaatcatgaaaaagatgactggcttaatcagcatagttattaccgacatatt
gggatttatgcctacagaacggatgttttggagcaaataactcaactaggtgtgtcttca
ctggaaaaagccgaatctctggagcagctcagatggattgaaaatggttatgctattcaa
gtagctgaaaccagctatgactctattggcattgatacgccggaagatttggagaaacta
aaacctttcctcagttaa
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