Fulvivirga ligni: LVD16_08860
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Entry
LVD16_08860 CDS
T09288
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
flw03009
]
LVD16_08860 (rimK)
Ribosome biogenesis [BR:
flw03009
]
Prokaryotic type
ribosomal protein modification factors
LVD16_08860 (rimK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
GSH-S_ATP
ATP-grasp_3
ATPgrasp_ST
ATPgrasp_YheCD
Dala_Dala_lig_C
ATP-grasp
R2K_3
Motif
Other DBs
NCBI-ProteinID:
UII23335
LinkDB
All DBs
Position
1993844..1994755
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AA seq
303 aa
AA seq
DB search
MKVGILSRNQDLYSTRRLVEACEVRGHECEVIDHLKCTLVMEQNNPTVIYKGRHLDDFNA
IIPRIGASVTFYGSAVVRQFEMMKVFTAVESQALIRSRDKLRSLQILSRAGLGLPKTVFT
NYSRDTDDILNGVGGAPVIIKLLEGTQGLGVVLAENKKAAASVIEAFHGLKARVIVQEYI
KEAGGADIRAFIVDGEVVGAMKRQAKEGEFRSNLHRGGTSQVIKLSRKEKSAAITAAKKM
GLGVAGVDMLQSSRGPLILEVNSSPGLEGIENATGLDIAGKIVEYLDRNSSKQKRIQKDK
VNA
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtaggaatcctatcccggaaccaagatttatattctacacgcagattagtagag
gcttgtgaagtgcgagggcatgagtgtgaggtgatcgaccaccttaagtgtaccctggta
atggagcaaaacaaccctacggtaatatacaaaggacgtcacctggatgacttcaatgct
attattcctagaataggtgcctctgtaactttctatggctcagcagtggtaaggcagttt
gaaatgatgaaagttttcaccgctgtggaatctcaagccttaatcaggtcgagagataaa
ctgagaagtttgcaaattctctctagagcgggtttgggattacctaagacagtattcaca
aactattccagagatactgatgatattttgaatggcgttggcggagctcctgttattata
aagttattagaaggtactcagggtctaggggtggtgctggctgaaaataaaaaagcagcg
gcctctgttattgaagcttttcatggacttaaagcaagagtgatagtgcaagaatatatc
aaagaagctggtggtgctgatattagagctttcattgtagatggcgaagtagttggtgct
atgaaaagacaagctaaagaaggtgagttcagatctaatctgcatagaggaggtacatct
caggtgattaaactatctcgtaaagagaagtctgcggccatcactgctgcaaagaaaatg
ggtctgggtgtagctggtgttgatatgcttcagtcatctagagggccattaatattggag
gtaaactcttcaccaggattagaaggaattgaaaatgctaccggtttggatattgcaggt
aaaattgttgaatatctggatcgaaacagtagcaaacagaaaagaatacaaaaggataaa
gtgaatgcctga
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