Fulvivirga ligni: LVD16_09855
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Entry
LVD16_09855 CDS
T09288
Name
(GenBank) efflux RND transporter permease subunit
KO
K18989
multidrug efflux pump
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flw02000
]
LVD16_09855
Transporters [BR:
flw02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LVD16_09855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UII23531
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All DBs
Position
2219840..2223259
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AA seq
1139 aa
AA seq
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MSDTNINKDNQPQVQEEHKEKEFGLTKLSLNNRNTVFFLLFLVVLMGITSYNNLPKDSYP
EVEQPMVYVGTTYPGNSPVDIENLITRPIEKEINDISDVDNIKSTSVQDYSTIIVEFESD
MDIDDALQKVKDAVDKAKQELPSDLDTDPNVFDMDFSQMPIMNINLSGNFSIEKLENIAE
DLEDELERISEVSSVEVRGVDDKEVKIMANPYLMDAREISFSDIEQAVAAENVTFSAGNL
KEGEQRRTIRVVGEYKDPQDLLNIVIKHQDDNIVYLGDVAKVEFGYIDPQSYARLALKPV
VSVDVIKGSGENLLIATDKINKVLDEMRPQFPEGLEITITNDQSQMTRDLVNSLENNIIS
GVILVVLVLLFFLGTRNALFVGVAIPVSMFITFLIMSVLGITINMMILFSLILALGMLVD
NGIVIVENVYRLMEEGLSPWEATRLGVSEVAWPIITSTATTLAAFLPLAMWPGLMGQFMK
YLPIGVMITLTSSLFVALVINPALISVFMKIEDGKKVNHNKILRNSGILVLLGTLILIFG
AAWLGNLLVFCGLLILLNVYVLMPASRRFQSGFLPWLEDLYSRTLSFALKGWRPWLFFWG
TIALLILSIALNVIKPPTVLFFPENLPKYVNVFIEFPIGTDIDKTNEFSKQVEKEVMEVV
KPYGEVVESVIAKVGQDTADPNDPGSFGATDTPNKARITVNFVEFKDRDGVDTREIFDEI
RNAIQGYPGVSISVDKDAAGPPTGKPINIEVSGDDINTLISITDRMKNYINTSGIEGIEN
LQTDLETGKPELLVNIDRDNARRFGLSTMTIASEIRTALFGKEISKYKEGEDDYDIELRL
QDEYRYDIETLKNKEITFRNNSGQIIQIPISSVANMELSSTYGSVKRKDLERVITLYSNV
LQGYNPTAINDDIKVLLEDFEMPAGYDFKFGGQQEKQAEEMAFLTQALWLAVFIIFLIIV
AQFNKITTPIIIMSSVGLSTVGVFLGLFVFSMDFVVIMTMIGIISLAGVVVNNAIVLIDF
IELIRARKQKALGVDRLSFDEIDAAIAEAGKTRLRPVLLTAITTILGLVPLAIGLNFDFI
KFFTEYHSDFYMGGDNVAFWGPMSWTIIFGLTFATFLTLVIVPIMYQFFAKINRKLNIS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatactaacattaataaagataatcaaccccaagtgcaagaagagcacaaggaa
aaggaatttgggctcaccaaattatccttgaacaacaggaatacggttttcttcctactg
tttttggtggtgcttatgggtattacatcctataataacctacctaaagacagttaccct
gaagtagagcagccaatggtttatgtgggtactacttatccgggtaactcaccagtggat
atagaaaacctgattacaaggcctattgaaaaagagataaatgacatttcagatgtcgat
aacataaagtctacctccgtgcaggattattctaccattatagtagaatttgagtctgat
atggatatagatgacgccctgcaaaaggtaaaagatgcggtggataaggctaagcaagag
ctgcctagtgacttagatactgatcctaatgtttttgacatggacttttcgcaaatgcca
atcatgaacattaacctttcaggtaattttagcatagagaagctggaaaatattgccgaa
gaccttgaagatgagctggagcgtatcagtgaagtatcttctgtagaggttagaggtgta
gacgacaaggaagtgaaaatcatggctaatccatatctgatggatgccagggagataagc
ttttctgatattgagcaagcggtagccgctgagaacgtaactttttctgcgggtaaccta
aaggaaggtgagcagagaagaaccataagggtagtaggtgaatataaagatcctcaagac
ctgcttaatatcgtgatcaagcatcaggatgataatatcgtttacctgggagatgtagct
aaagtagaatttggatatatagatcctcaaagttatgccagattagcgttaaagccggtg
gtgtctgtagacgttataaaaggtagtggagaaaacctgcttatcgccactgataaaatt
aataaggtactagatgagatgagacctcagtttcctgaaggtcttgagattaccattacc
aatgaccaaagtcagatgaccagagacttggtaaacagcttggagaacaacattatctct
ggggtaattctggtagtattggtattacttttcttcctgggtacacgtaacgcccttttc
gtaggagtcgctattccggtgtccatgttcattaccttcttgataatgagtgtgttgggt
atcactattaatatgatgatcctcttctcgctgatcttagcattgggtatgttggtggat
aatggtattgtaatcgtggagaacgtatatcgtcttatggaggaaggactttctccttgg
gaagctaccaggttaggggttagtgaggtagcttggcctattattacatctacagccact
acattggcagccttcttaccgttagccatgtggccaggacttatgggtcagttcatgaag
tacctacctatcggtgtaatgattacgcttacctcgtcattatttgtggcactggtaatc
aacccggctcttatctctgtgtttatgaagatagaggatggtaaaaaagtgaaccataat
aagatattaagaaactctggtatccttgttcttctgggtacattaatcttgatatttgga
gcggcttggttaggtaacttgctagtattctgtggattattaatccttttgaatgtttac
gtattgatgcctgccagtagaagattccagtctgggttcttaccatggttagaagattta
tattccagaacactttctttcgctcttaaaggctggagaccttggttgttcttctggggt
actatcgcgctgttgatattgtccattgccttaaatgtgatcaagccaccaaccgtactg
ttcttccctgagaacttaccaaaatatgtgaacgtatttattgaattccctataggtact
gacattgataagaccaacgaattctctaaacaagtggagaaggaggtgatggaagtggtg
aaaccttatggagaagtggtagagtcagtaatcgcgaaagtagggcaagatactgctgat
cctaacgatccaggatcattcggagctactgatacaccgaataaggctcgtatcactgta
aactttgttgagtttaaggatagagatggagtagataccagagagatttttgatgagatt
cgaaatgctattcaagggtacccaggtgtatcaatatcagtagataaagatgcagcagga
cctcctaccggaaagcctattaatattgaggtgtcaggtgatgatatcaatactttgatt
tctattactgatagaatgaaaaactatatcaatacatcaggcattgaaggtatagaaaac
ttacagactgacttagaaactggtaaaccagagcttctggtaaacattgatagagataat
gccagaagatttgggctctctaccatgactattgctagtgaaataagaacagctcttttc
ggtaaggaaatcagtaagtataaagaaggagaagatgattatgatatcgagctgagactt
caggatgaatatagatatgatatagaaacgttgaaaaacaaggaaattactttcagaaat
aacagcggtcaaatcattcagattccaatcagttcggtagccaatatggagctaagctct
acttatggttctgttaaaagaaaggatttggagagggtgattactttatattctaacgtg
cttcagggctataaccctacggctatcaatgatgatattaaggtgttacttgaagatttt
gaaatgccagctggttatgacttcaaatttggtggtcagcaagagaagcaggcagaagag
atggccttcttaactcaggcactttggttagcagtattcattatattcctgatcatagta
gcacagtttaacaagattaccacaccgatcatcatcatgtcttcagtaggtttgagtacg
gtgggagtgttcttaggcttgttcgtgttcagcatggacttcgtagtgatcatgaccatg
attggtatcatttcactggcgggtgtggttgtaaacaatgccattgtattgatagacttt
atagaactgatcagagcaagaaagcagaaggcgttaggagtggatcgattaagttttgac
gagatagatgctgccattgcagaggctggtaagacaaggcttagacctgtattattgacc
gcgataaccactatcctggggcttgtaccgctagctataggtttgaactttgactttatt
aagttcttcacagagtatcactcagatttctatatgggtggtgataacgtagcattctgg
ggaccaatgtcctggactattatattcggacttaccttcgctacgttcttaaccttggta
attgtaccgatcatgtatcagttctttgctaagattaatagaaagctgaatatcagttaa
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