Fulvivirga ligni: LVD16_10935
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Entry
LVD16_10935 CDS
T09288
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
flw
Fulvivirga ligni
Pathway
flw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LVD16_10935 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flw03400
]
LVD16_10935 (priA)
Enzymes [BR:
flw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVD16_10935 (priA)
DNA repair and recombination proteins [BR:
flw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVD16_10935 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
TrmB
DUF7905
nSTAND3
Raptor_N
AAA_30
nSTAND6
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UII23740
LinkDB
All DBs
Position
complement(2473871..2476387)
Genome browser
AA seq
838 aa
AA seq
DB search
MSQLEFQNNSTQGRKTFFVDVVLPVPIPKMFTYRVPHELSDKIVVGARVIVQFGQRKVLT
GVIGRIHETPPEKYEAKYLLELLDEEPVIQPLQISLFQWIANYYMCTIGEVLNMALPSGL
KLSSESKVQLHPHFDYYESDIDFSDKEATVIEALQNDEVLSYSEIGRLVNQKTIYSLIKS
LVYKGAVLLFEEVKEKYKPKKETRIRMSQFLADNKEELESLFENLEKKPKQEAILLHYLQ
EIPVFNHPERNRDGIPKASFNEGDLSTSSLRTLVKNGVFEEFEVIISRFDNHDQSLKEVT
LTDIQQQAKEEIMASFQEKDISLLHGITGSGKTEIYISLIQDALEGESQVLYLLPEIALT
TQIVNRLRKIFGDKMGVYHSKFSDNERVEIWKGVLSGKYQFVVGVRSAVFLPFDNLGLII
IDEEHESSYKQYDPAPRYNARDLAFVIAREHHAKVLLGSATPSIESQFHAQSGKYGLIKL
NTRFGSGALPDFQVADMVRQRNKKLLKGEFSTELVEAITLAMEQKEQVIVFQNRRGYSPY
LMCNECGWVPKCENCAVSLTYHQYKAEMRCHYCGYKEPVPHACEACGSTNMNTMGFGTEK
LEEELSLLFPDARIQRMDLDTTRRKNSYDNIISDFENGYVDILVGTQMVSKGLDFDNVNL
VGIFDIDRMLHFPDFRSFERAFQLSTQVSGRAGRRDKKGKVIIQSRNIEQTILTQIVTHD
YNSFYKQELAERQLHGYPPFTRLINVIVKNKDAQTAKTTAIKLGNLLKEQLGAKRVLGPE
EPLISRIRNEYLMELSVKLERSKINLSKAKTVMQEMAHEVLQEKGLKSSRIIFDVDPY
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgagccagctggagtttcaaaataatagcacccaaggtagaaaaacattttttgtagat
gtagtgctacctgtgcccataccaaaaatgttcacttaccgcgtgccgcatgagttgagc
gataagatagtggtgggcgctcgcgttattgtacagtttggccagcgtaaagtacttacc
ggagtcatcggtaggattcatgagacaccaccagaaaagtatgaggctaaatatttatta
gagctcttagatgaagagcctgtaatccagcctttgcaaatatctcttttccaatggatt
gccaattattacatgtgcaccataggcgaagtgctgaatatggcgttgccctcaggtctt
aagctcagcagtgaatctaaagtgcaactgcacccccattttgactactacgaatcagat
attgactttagtgacaaggaagctacagtaattgaagcgctgcaaaatgatgaagtatta
tcatacagtgaaataggccggctggtcaatcaaaagaccatttacagcttaatcaaatcg
ttagtatacaaaggtgctgttttgctttttgaagaggtcaaagagaagtacaagcctaaa
aaagagacccgtataaggatgtctcagtttttagctgacaataaggaagaactggaatct
ctttttgaaaacctggagaagaagccgaagcaagaagccatattattacactatttacaa
gaaattccggtcttcaaccatcctgaaagaaaccgcgatggaataccaaaggcctctttt
aatgaaggtgatttatctacctcttcattaagaacattggttaaaaatggcgttttcgag
gaattcgaagtaatcatcagccgattcgacaaccatgaccaatcgctaaaagaagtaaca
ctaaccgacatccaacagcaagctaaggaagaaattatggcttcctttcaggaaaaagac
atttctctgctacatggaattacaggtagcggtaaaactgaaatttatatcagtctgatt
caggatgcgttagagggtgaaagtcaggtgttatatttgttacctgaaattgcactaacc
actcaaattgttaaccgactaagaaaaatattcggagataagatgggtgtttatcactcc
aaattctctgataatgaacgtgttgagatttggaaaggtgttttatctggcaagtaccag
tttgtggttggcgtaagatcggcagtatttcttcctttcgataatcttggcttgattatt
atagacgaagagcatgaatcttcctacaaacaatatgacccagctcctcgctacaatgcc
cgtgatctggcctttgttatcgcccgggaacatcacgccaaggtattgctaggatcagct
actccatctatcgagtcacagtttcatgctcagagtggaaaatatggactcataaaatta
aacacccgatttggtagtggtgccttacccgattttcaagttgctgatatggtaaggcag
agaaataaaaagcttttgaaaggtgagttttctaccgaactggtagaagctattacactt
gcgatggagcaaaaagagcaggtcatcgtgtttcaaaaccgtcgtggctattctccttac
ctgatgtgcaatgagtgcggctgggtgccaaaatgtgaaaactgcgctgtaagtctcacc
taccatcagtataaagcggagatgcgctgccattattgtggttataaagagcctgttcct
catgcttgtgaagcctgtgggtctaccaacatgaacaccatgggatttggtacagaaaag
ctggaagaagaactgtctcttctgtttcctgatgctcgtattcaaagaatggacctagac
actacgcgcaggaagaatagctatgataatataatctcagactttgaaaatggctatgta
gatatattggtgggcactcaaatggttagtaaagggctggactttgataatgtgaatttg
gtaggcattttcgacatagacagaatgcttcactttcctgatttcagatcttttgaaaga
gcctttcagctttctactcaggtcagcggcagagcaggccgaagggataaaaaaggtaag
gtaatcatccaatcaagaaatatagagcagactattcttactcagatagttacgcatgat
tacaattcattttataagcaggaactagctgagagacagctacatggataccctcctttc
accagacttattaatgtaatagttaaaaataaagatgctcaaacagctaaaactacagcc
atcaaactcggtaatctattaaaagaacagcttggtgctaaaagagtacttggccccgaa
gaacccttaatatcaagaataagaaatgagtacctgatggagctatctgttaagctggag
cgatcgaaaataaacctaagcaaagcaaaaacagtgatgcaggagatggctcatgaagtg
ctacaggaaaaaggcctcaaatcatcgcgcataatttttgatgtagatccgtactaa
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