Fulvivirga ligni: LVD16_12555
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Entry
LVD16_12555 CDS
T09288
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flw03016
]
LVD16_12555 (mnmE)
Transfer RNA biogenesis [BR:
flw03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LVD16_12555 (mnmE)
Prokaryotic type
Methyltransferases
LVD16_12555 (mnmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
MMR_HSR1_Xtn
GTP_EFTU
RsgA_GTPase
Ras
Dynamin_N
Arf
Roc
Guanylate_kin
ABC_ATPase
ABC_tran
AAA_29
AAA_18
AIG1
FtsK_SpoIIIE
RickCE_N
Motif
Other DBs
NCBI-ProteinID:
UII24049
LinkDB
All DBs
Position
complement(2930255..2931634)
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AA seq
459 aa
AA seq
DB search
MSQHIGSTEDTIVALSTAPGVGAIAVIRLSGDDAIKICNSVFKGKDLEKQPTHTLHFGTI
RDGEKVIDEVVVSLFVGPKSFTKENVVEISCHGSPFIVKQVIKVLLAAGSRLALPGEFTK
RAFLNGQFDLAQAEAVADLINSDSAASHEAALNQMRGGFSEQIRQLREELIHFASMIELE
LDFGEEDVEFADRDDLKNLINNLLKVINALIESFDLGNVIKNGVPTVIAGKPNAGKSTLL
NALLNEEKAIVSDIAGTTRDVIEDEINLGGITFRFIDTAGIRETEDTIEKIGVERTQAQM
KKASLIIYMIDLANDNVVDFNRDINKLENMGIPFIVVGNKIDKAQPELKSAVEGVKGSIL
IAANTKENLDALKDRILEEVNLDNFKSGNTLVTNIRHYDNLLKTRNALQDVLNGLGNNIT
GDFLAMDIRQSLHYLGEITGEITTDDLLANIFSKFCIGK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcaacacataggatccactgaagatacaatagtagctctttctacagcaccaggc
gtaggtgccatagcggttataagactttctggcgatgatgccattaaaatatgtaacagt
gtatttaaagggaaagacctggagaagcagcctacccacacactacatttcggcactata
cgagatggagaaaaagtgattgatgaagtggtggtatctctatttgtaggaccaaaatca
tttactaaagaaaatgtcgtagagatcagctgtcatggctctccttttattgtaaagcaa
gtaattaaagttcttctagctgccggctcaagactggctctacctggggaatttaccaaa
agagcctttttaaatggccagtttgacctggcccaggctgaggctgtagccgatcttatc
aattctgattctgcggcctcgcatgaagccgctcttaaccagatgcgtggtggcttttcc
gagcaaattcgccagctaagggaggagcttatacattttgcctctatgatagagctggag
ctagactttggcgaggaagatgtagaatttgctgacagagatgacttaaagaacctgatc
aacaacttgctgaaagtaatcaacgccttaatagagagctttgacctgggtaatgtcatt
aaaaatggtgtacccaccgtaattgcaggtaagcccaatgctggtaaatctactttgctc
aacgccttattaaacgaagaaaaggctattgtatctgacattgcaggtaccaccagagat
gtgatagaagatgaaattaacctgggcggcatcacctttaggtttattgatacagctgga
attcgtgaaactgaagatacgattgaaaaaattggagtggagcgaacgcaggctcaaatg
aaaaaggcctctcttattatatatatgattgacctggccaatgacaatgttgtagacttc
aaccgcgacatcaacaagctggaaaatatgggtattccgtttatagtggtgggcaacaaa
attgacaaggctcagccagaactaaaatcagctgtggaaggtgtaaagggatccatactt
atagccgctaacaccaaagagaatctggacgctttgaaagatagaattttagaagaggtt
aatcttgacaacttcaagtctggcaacaccctagtaaccaacattcgccactatgacaat
ctacttaaaaccagaaatgccctacaagatgtcctcaacggcctcggcaacaatatcact
ggcgactttttagctatggatattaggcagtcattacattatttaggagagatcactggt
gagattactacagatgatttgttggcgaatatctttagtaagttttgtattggcaaataa
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