Fulvivirga ligni: LVD16_13380
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Entry
LVD16_13380 CDS
T09288
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
flw
Fulvivirga ligni
Pathway
flw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LVD16_13380 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flw03400
]
LVD16_13380 (xseB)
Enzymes [BR:
flw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LVD16_13380 (xseB)
DNA repair and recombination proteins [BR:
flw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LVD16_13380 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
FIVAR
TBCA
PMEI
HMMR_N
XhlA
DUF5601
TPR_Edg1
RPW8
MecA_N
DUF7187
Exo70_N
RecG_N
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
UII24208
LinkDB
All DBs
Position
complement(3154799..3154996)
Genome browser
AA seq
65 aa
AA seq
DB search
MAKKKISYKNAVEEIESIIDKIENGEPDVDELSELVKRAAGLIKDCKEKLKSTEENLSET
LEELE
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaagaagattagttataaaaacgcagtagaagagatagagtctattattgat
aaaatagaaaatggagagcctgacgtagatgagctttcagagcttgtgaaaagagctgca
ggactgattaaagactgtaaagaaaaactgaagagtaccgaggaaaacctttctgaaaca
ctagaagaattagaataa
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