Fulvivirga ligni: LVD16_17095
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Entry
LVD16_17095 CDS
T09288
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flw02000
]
LVD16_17095
Transporters [BR:
flw02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LVD16_17095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
UII19558
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Position
complement(4047342..4049102)
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AA seq
586 aa
AA seq
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MKNTYYLLILTLLGGLGWSCQEERFLDETETTNLNEEVVFSDSAYTTQFLFDIYRDIGFS
NSPARFNSGGFFPQTTGGLQTASDESEPRIINAITTDIQFITGTVNPIIISSDPWNIPYR
NIRKVNQLLKNLPNAPLNDNLKAQYAAEGRFLRAWYYYLLVQHYGGVPLIGDEIYTAEGE
ISGARATYEQCVNYIVSECDEAAKVLAIRPRGRDFGRVGAGACMGLKARMLLHAASPLHN
GSDFASGDLKEILGYASFDANRWKLAADAAKDLINLEVFKLFNDNSEEPGRGFYSLFIAS
DAIGNGDPIDQCIILMKMEDKGQGRERLFQPPSRGGTGGGGFPYQETVDAFAMSNGKLIT
DPSSGYDPQDPYVGRDPRFYNSIIYDQTQLIVPAGSLTPVDIYTGTYQGSAASEDAVFTG
TPTGYYTNKMLHREIVANYWIGGPQSRPLIRYAEVLLNFAEATNEFSGPISEVYQAVEAV
RERAGLDPFILPAGLSKEAMREVIHHERRVELAFEGFRFWDVRRWMIAEETQANTMTGME
VKRNGEAVSYNKFNVRKHIFRDALYYWPIPQSEVGKSPEMLQNPYY
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacacttactatttgctaatcctgacattattagggggacttggctggtcctgt
caggaagagagatttcttgatgaaacggaaaccactaacctcaatgaagaggtagttttt
tctgatagtgcgtacactacccagtttctcttcgatatctacagagatattgggttcagt
aacagtccggcccgttttaatagtggcggatttttccctcagaccactggaggtctgcaa
acggcatctgatgaatccgaaccgagaattatcaatgccatcaccactgacatacagttt
atcactggcaccgtaaatcccattattatcagcagtgatccctggaacattccttatcga
aacatcaggaaggttaatcagctattaaagaaccttccaaatgcacctctgaatgataac
cttaaagcacaatacgcggctgaaggtagatttttgagggcctggtactattacctgctg
gtgcagcattatggtggtgtaccgttaattggagatgaaatctacactgctgagggtgag
atttctggtgcgcgtgctacttatgagcagtgtgtgaactacattgtttctgaatgcgat
gaagcagctaaggtattggccatcagacctagaggtcgtgattttggtagggtaggagct
ggtgcatgtatgggtcttaaagccagaatgctactgcacgctgccagccctttgcataac
ggtagcgattttgcttctggtgatcttaaggaaatactaggttatgctagctttgatgct
aaccgttggaaactggccgcagatgccgctaaagacctcattaatttggaagtctttaaa
ttattcaacgataactcagaggaacccggccgtggtttctatagcctttttatagccagc
gacgctataggtaatggtgatcccattgaccagtgcatcattttgatgaagatggaagat
aagggccagggtcgagaaaggcttttccaaccaccatccagaggtggaacaggtggtggc
ggctttccttatcaggaaacagtagatgcttttgccatgagcaacggtaaattaatcact
gacccatcgtctggttatgatcctcaagatccttatgtgggtagagatcccagattttat
aattccatcatttatgatcagacacagctaattgtccctgcaggatcattgaccccggtt
gatatctatactggcacatatcaaggatccgctgcttctgaagatgcagtatttacaggc
actcctacaggttattacactaacaaaatgcttcacagagagatagttgctaactattgg
ataggaggcccacagtcgcgtcctctgattagatacgctgaggtattactcaattttgct
gaggcaactaatgaatttagtggtcccatctcagaagtatatcaagctgtagaagcagtg
agggaaagagctggtttagatccatttatactaccagcaggcctttctaaagaagctatg
agagaggtgatccatcatgaaagaagggtagaacttgcctttgaaggattccgattctgg
gatgtaagaagatggatgatagccgaagaaactcaggccaataccatgactggtatggaa
gtaaagcgcaatggtgaggctgtaagctacaataagtttaatgtgagaaagcacatcttc
agagatgccctctactattggcctattcctcagagcgaagtgggtaaaagccctgaaatg
cttcaaaatccatattactaa
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