Fulvivirga ligni: LVD16_17330
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Entry
LVD16_17330 CDS
T09288
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
Organism
flw
Fulvivirga ligni
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
UII19604
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Position
4113560..4115395
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AA seq
611 aa
AA seq
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MKNIYIIAFALIIIAGCKEDWLEPKPLSFYAPENTYNTPDGLRSGIVSCDANLRYTEFYG
DGAAIVTELIFSDVAVEGTTDKSGPAQNMNLQIQPDAQLNNTNNNRIGRYWYEGYKGIKY
ANTVISRIDDAEYENEQERNEILAAALWHRAYRYYRLVHQFGDVPLILQEITEPRLDFYS
TKREVILQKIKEDLEFAEQWVPYVVNRGTVTKGAVSHLLAKVNLALGDFDGAIAAASHAI
DDGPYALMTERFGVDASDASKNVVWDLHRPLNKSLPENSEVLYVLIDRPDMIGNTTDLFQ
GIQTIRNAGPFYSIAGANAIRTPNGNVGMNGNGGIEIPLSEMYGRGIGRCRATWYSTHLI
WDDENDLRHAPGNWMRMEDLVYNNENLKGVDPYYGQPLQLYSEDGTLLTNDTIRNWFDWP
HYKLWVPDNINVPQRGGNSDWYVFRLAETYLLRAEAHYWKGELGLAADDINKVRNRAGAG
SYTAGDINIGTILDERARELYYEEPRNTELSRIAYIFAQTGEAAYNGKSYNLADFGKDNF
WFDRIMEKNDFYNKGVVTVHGDTYTMSPYHVLWPIPINAIVSNSQGKIHQNFGYNGYDPS
VPVLEEIEETE
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatatatatattattgcgtttgcactaatcatcatagcaggctgtaaggaagac
tggcttgaaccaaagccgctctccttctatgcacctgagaatacttacaacacgccagat
ggacttcggtcaggcatagtatcctgcgatgctaacctccgatacaccgagttttatggt
gatggggcagctattgttaccgagctcatattctctgatgtagctgtggaaggcaccact
gataaatcggggccagcacagaacatgaacttgcagatacagcctgatgctcagctaaat
aacaccaataacaaccgtataggaagatactggtacgaaggctacaaaggcattaaatat
gctaatacggtcatttcaaggatagatgatgccgagtatgaaaatgagcaggaaagaaat
gaaattttggcggctgccttatggcatagagcttatcgctattaccgattagtgcatcag
tttggtgatgtgccattgatccttcaggaaattacagagcccaggttagacttttactcc
accaagagagaggtaatcctacaaaagatcaaggaagacctggagtttgctgagcagtgg
gttccgtacgtagtgaacagaggcactgtgaccaaaggagctgttagccatttactggcc
aaagttaatctggcactgggagatttcgatggagccatagctgccgcttctcatgctata
gatgacggtccttacgccctcatgacagagcgatttggtgtagacgcctctgatgcttct
aagaatgtggtttgggacttgcaccgtccattaaacaagtctttacctgaaaactctgag
gtgctctacgtgctgatcgaccgtcctgatatgattggtaatactacagatctgtttcag
ggcatccagactataagaaatgcaggaccattctactctattgcgggtgctaatgctata
agaaccccaaacggaaatgtaggtatgaatggaaatggtggaatcgagattcctctctca
gaaatgtatggcagaggaattggccgatgccgggccacctggtattccacccaccttatc
tgggatgatgaaaatgacctgcgtcatgctccaggcaactggatgagaatggaggatctg
gtttacaataatgagaacctaaaaggagtagacccatattatggtcagcctctgcagctc
tattctgaagatggcaccctccttaccaacgacaccataagaaactggttcgactggcct
cattacaagctttgggtgcctgataatatcaacgtacctcagcgtggtggtaactcagac
tggtatgtgttccgactggcagagacctatctattaagagcggaggctcactactggaaa
ggcgaattaggcctggctgctgatgatattaacaaggtaagaaaccgtgcaggagccggt
agctacacagcaggtgatattaacataggaactatactggatgaaagagccagagagctg
tactacgaagagccaagaaacaccgagctcagccgaatagcctatatcttcgcccaaaca
ggcgaggccgcgtataatggtaaatcctataatctggccgattttggtaaggataacttc
tggttcgacaggatcatggaaaagaatgatttctacaataaaggcgtagttaccgtacat
ggcgatacttacaccatgagcccttaccatgttttatggcctatccctatcaacgctatc
gtatctaacagccagggaaaaatccatcagaactttggttacaacggctacgatccatca
gtaccggtattggaagagattgaagaaactgaataa
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