Fulvivirga ligni: LVD16_17670
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Entry
LVD16_17670 CDS
T09288
Name
(GenBank) TonB-dependent receptor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flw02000
]
LVD16_17670
Transporters [BR:
flw02000
]
Other transporters
Pores ion channels [TC:
1
]
LVD16_17670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
UII19672
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Position
4196422..4198665
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AA seq
747 aa
AA seq
DB search
MKQLVIIYIIFITGQLYGQSSVTILDKDTHLPIEGAQIRFIAGSNFENGISDAEGQVYTH
LTPSFTIQISHVEYKGLETTISEINTTIYLEPNTTLLNPVVITSQYNPQSAKNSVYMVKS
ISADRIQKQAAVTIQEVLKNEVNIQFSRDNAVGTSDISLLGLPGQYVKILIDGVPMAGRS
GVNNAIDLNQLNINNIQQIEIIEGPMAVNYGADALAGVINIITKKEISPQWKLNLKLHEE
TVENSYSILDEGIHAPAATFAYQATDKWFFQGEGRYNKFGGWIGDLENYDDRNRQWYPKE
QYNLGGLARYSSEGFELYYRTNYLHETIENLGTPSTGLYDAKANDEEYITTRWNHQLQSE
ITWGKLKLQPVLSYTDYLRITDAYTLNLVTNDRATTKQDSVSFKTIFHRNTLNGIKWAWG
SAEIGFDSNHETASSTKLSDGDKSATDLNLFISAEIKAGEKLLIKPGIRYGYHSIYKTAP
SPAVNFKYHISDNSQVRLGYGRGFRAPSLRELYHEFIDTNHRIIGNEELEPEYSHQVNAD
YTQFLFNQRVKTTVSGFYNYIKNRIGYITPQENNPDQATTYQNISEYKTTGGSFSTQWQH
SNLSVSAGFSYIGTYQNLNLSYDVPQFLFGTQLTGSFEYRLPKPELSFSLFYNYNGKSKG
YNLVEEGEEMVPRLQSRDAYHFLDLTVAKPINAWASVSVGSKNLLNVTTVNNNLNSGGAH
SSSTGQTSIGYGRSYFIQMNFNLQSNK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctagtaataatatacatcatattcatcacaggccaactctatggacagtct
agtgtcactattcttgataaagacactcacctgcctattgaaggagcacagataagattc
attgcaggatcaaatttcgaaaacggcatttcagatgctgagggtcaggtatacacccat
ctaacacccagctttaccatacaaatatcacacgttgaatacaaagggcttgagacaacg
attagcgagataaacaccaccatttatcttgagcctaataccacattgttgaatccggtt
gtgatcacttcacagtacaatccacagtcagcaaagaattctgtgtacatggttaaatcc
atttctgctgatcgcattcaaaagcaagcggctgttaccattcaagaagtactaaagaat
gaagttaacatccagtttagcagagataatgcggttggtacctcggacatctcattgctt
ggtcttccgggacagtatgtaaaaattctcattgatggcgtgcctatggctggtcgtagt
ggtgtgaataatgccattgatctgaaccagctcaatatcaacaacatacagcagatagaa
atcatagaaggacctatggccgtgaattatggggccgatgcactagctggtgtgatcaat
atcattaccaagaaagaaattagtcctcaatggaagttgaacctcaagctgcatgaggag
accgtagaaaattcctacagcattttggatgaaggaattcatgctcctgctgcaactttt
gcctatcaggctactgacaaatggttttttcaaggtgaagggcgctacaataaatttggt
ggctggattggcgatcttgaaaattatgatgatagaaatcgccaatggtatccgaaggag
caatataacctgggtggcttagcgcgctatagctctgaaggttttgaactctactatcgc
actaattatctgcatgaaactatagaaaatttaggaacgccaagcactggactttacgat
gcgaaagcaaatgatgaagagtacatcaccaccagatggaatcatcaacttcaatcagaa
ataacctggggtaagctgaaacttcagcctgttctgtcttataccgattatctgagaatt
actgatgcctacacactcaacctggtcactaatgatagagcgaccactaaacaggattcc
gtttccttcaaaaccatcttccacagaaacaccctgaacggcataaaatgggcctgggga
agcgctgaaataggctttgacagcaaccatgaaaccgccagcagtactaagctcagtgat
ggtgataaatcagctacggaccttaacttatttatcagcgcagagataaaagctggtgaa
aagcttctgattaaacccggcattagatatggctaccacagcatttacaaaacggctccc
tcccctgccgtaaattttaaataccatatttctgacaattctcaagttcgtttaggttat
ggcaggggattcagggcgccgtctctcagagaattataccatgagtttattgacaccaat
caccgcattattggtaacgaagagctggaaccagaatattcacatcaggtgaatgctgat
tacacccaatttctatttaatcaacgagttaaaaccaccgtatctggtttttataactat
atcaaaaacaggataggctacatcactcctcaggagaacaatcctgaccaggccaccact
tatcaaaacatatccgaatacaagactaccggaggatcatttagcactcagtggcagcac
tctaacctatcggtgagtgcgggcttcagctatattggcacctatcaaaaccttaacctg
agctatgatgtaccgcagttcttatttggaactcaactgacaggcagctttgaatacaga
ctacccaagccggagctatccttttcgctattctataattataatggaaagtctaaaggc
tacaacctggtggaagaaggtgaggaaatggttcctagactacagagccgagacgcctat
cattttttagaccttaccgttgcgaaaccaatcaatgcctgggccagcgtttctgtgggt
tctaaaaatctattgaatgtaactacagtaaataacaacctcaattcaggtggagcacat
tccagcagcaccggccagacttctataggatatggcagatcttatttcatacaaatgaat
ttcaatttacaatccaataaataa
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