Fulvivirga ligni: LVD16_21330
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Entry
LVD16_21330 CDS
T09288
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
flw
Fulvivirga ligni
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GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
Response_reg
HTH_8
AAA_5
Mg_chelatase
AAA
HTH_50
HTH_30
AAA_16
BrxC_BrxD
AAA_19
AAA_2
HTH_28
bpMoxR
DUF815
HTH_1
AAA_7
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UII20388
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Position
5079003..5080397
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AA seq
464 aa
AA seq
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MVEKSEKIGRILIVDDNEDLLKAAKIFLKRHFAQVDLEKNPQSIPALITNDDYDVILLDM
NFTKDVSSGKEGYYWLEKILEIDPSAVVVLITAYGDVQMAVKAIKAGATDFVLKPWENEK
LLATLFSAMKLRQSLQQVEDLMTKQKEINLQINSKYENIIGQSPAIRRVFETIDRVAATD
ANVLILGENGTGKELVARAIHNNSGRKDQVFVNVDLGSVSETLFESELFGHKKGSFTDAK
EDRAGRFEIANNGTLFLDEIGNLSLPLQAKLLTAIQNRRVSRVGSNKEVNIDIRLVCATN
MPLYDMVKDNKFRQDLLYRINTIEIELPPLRDRLEDIPLLAEHFLKQYSQKYGKPALKIS
DGATSRMQKHSWPGNIRELQHAIERAVIMSGSQVLQPEDFNFNAQPQNSMEGENVMLDQF
KLEDVEKILIRKVLKKYNGNITQAASELGLTRSSLYRRLEKYGL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaaaaagtgaaaagataggccgcatacttattgttgatgacaatgaagactta
ttaaaggcagcgaaaattttcttaaagcgtcattttgcgcaggtagatctggagaaaaac
cctcaatccatacctgccctcatcaccaatgatgactatgatgtgatcttgctggacatg
aatttcactaaagatgtaagtagtggtaaggaaggatattattggttggagaagatcctt
gaaatagatccgtctgcagtagtggtgctaattacagcttatggtgatgtacagatggcc
gtaaaagccataaaggccggagctacagacttcgttttaaaaccatgggagaatgaaaaa
ttactagccactcttttctctgctatgaaattaaggcaaagcttacaacaggtggaagac
cttatgaccaagcaaaaggaaatcaacctgcagattaactcgaagtatgagaatatcata
ggtcaaagcccggccatcagaagagtattcgaaactatagaccgtgtagctgctacggat
gccaatgttttgattctaggagagaatggaaccggtaaagaattggttgccagagctata
cataacaattcaggtcgtaaagatcaggttttcgttaatgtagatttaggttcagttagc
gaaacactatttgaaagtgagctttttgggcataagaagggttcatttacagatgccaag
gaagatagagccggtcgttttgaaattgccaacaatggaaccttatttttagatgaaata
ggcaacctgtccctgccacttcaagccaagctgctcactgccattcagaaccgaagggta
agccgtgtaggatcaaacaaagaagtaaatattgatatccgcttagtctgcgccactaac
atgccgctgtatgatatggtgaaagacaataagttcaggcaagatttactttaccgcatc
aacaccattgaaatagaactacctccactacgagatagactggaagatataccgctattg
gcagaacattttctaaaacaatactcacagaaatatggcaaaccagcactgaagattagt
gatggagccaccagcagaatgcagaagcacagctggccgggaaacattagagaattacaa
catgccatagaacgtgccgtaattatgagcggatctcaggtacttcagccagaagatttt
aactttaacgcgcagccgcaaaacagcatggaaggtgaaaatgtaatgctggatcaattt
aaactggaagacgtagaaaaaatcctgataagaaaagtgcttaagaaatacaacggaaat
attacccaggcggcttcagagctaggcctaaccagatcatcactctatagaagattagaa
aagtatggtctataa
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