Fulvivirga ligni: LVD16_21490
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Entry
LVD16_21490 CDS
T09288
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
flw03036
]
LVD16_21490 (smc)
Chromosome and associated proteins [BR:
flw03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LVD16_21490 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
SMC_hinge
AAA_15
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UII20418
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Position
5125799..5129326
Genome browser
AA seq
1175 aa
AA seq
DB search
MQLSKLEIKGFKSFGDKVTINFDEGITGIVGPNGCGKSNIVDSIRWVLGEQSSRTLRSEK
MENVIFNGTKKRKPTQLAEVSLTFNNTKNLLPTEYSQVSITRRYYRSGESEYLLNGVTCR
LKDITNLFLDTGIASNSYAIIELKMVDDILNDKDNSRRGLFEEAAGISKFKKRKKETLKK
LQDTDADLERVEDLLFEIDKNMKSLERQAKQTEKYYQLKEEYKQLSVLLARLTINKFSEN
HKNIGKKIEAENDKKLSLNKQITEKEASLEKAKSEMILKEKALSARQKTLNEHVNKIRQY
ESEKKIKNERLRFLNDKSDSLKDQIELDRKSNERAKFSLEGLGQEKGAAEKILAEIEMKL
NGLKEDYDAQKIKTADLQAQVDDIRKTQKNKQEEVYQLKKSVEIKELQLSSLKQELEKTA
SDTNQQSASLVEFDQKVSSLSEQLNVKNNLQEKLKREESDLQARIESTEKTIEVIREELT
QTNRKLDAKQNEYNLTKSLVESLEGFPEAIKFLKKKAQWNKNAPLLSDILTCEDKYRVTI
ENYLEPYLNYYIVEKEEDAYEAINILSDAARGKANFFILKAFENFTPSGTSLYSNAFPAT
EIMEYDSKYRKLMGHILDKVYILEGDYNSIPKDDDNIFITQSGKVTRRRYSISGGSVGLF
EGKKIGRAKNLEKLDKEIKHLSKKLSEIEQSHSEKQKELEKLKSSTKRDDLEELREEVKL
INEEYISIKTKQEQFSKMLSDADMRKEDIMDKIEELREQIEEDKPKAENEEKWQLEKEIQ
LNQSSTELHEQSEILSQKSSAFNEQNILFHQQDNKVKSLEQEIEYKTDTFENSKLRIEKN
QVELKENESEIKQLLEKAETSDDELISMYEEKESIETGVNEAEREYYDVRAQIDDADKAT
REIQRNRESIDTILMELQNSLNETKIQLNSVKERLSVEFNIKVDEIMDEAPEEEVEPEEL
RQRVEKIKDKLDKMGPINPMAMEAYQEIKERNDFITTQREDLFNAKESLLTTIGEIDAVA
KETFIEAYEKIKENFVKVFRSLFTEEDDCDLRLSDPDNPLESSIEIIAKPKGKRPLTINQ
LSGGEKTLTATSLLFSIYLLKPAPFCIFDEVDAPLDDANIDKFNNIIKTFSKESQFIIVT
HNKRTMASTDVIYGITMIEQGVSRVIPVDLRELAD
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgcagctttccaaactggaaataaaaggttttaaaagttttggcgacaaggttacgatt
aatttcgatgaggggattacaggaattgtaggtcctaatggctgtggtaaatcaaatatt
gtagattctatacgttgggtactgggagagcagagcagtagaacgctacgctccgagaag
atggaaaatgtcatattcaacggtaccaaaaaaagaaaacctacacagctagccgaagta
tctcttacctttaataatactaagaacttattacccacagaatattctcaagtttcgatt
accagaaggtattacagatctggggaaagtgaataccttttaaatggggtcacctgtaga
cttaaagatattaccaacctctttttagacactggtattgcatctaacagctacgccatc
attgagttgaagatggtggatgatattttgaatgataaggataactcaaggagagggtta
tttgaagaggccgctggtatttcaaagtttaagaaaaggaagaaagaaaccctaaagaag
cttcaagatactgatgctgacctggaaagagtggaagatttgctttttgagatagataaa
aacatgaaatctctggagcgacaggctaagcaaactgagaaatattatcaattaaaagaa
gagtataaacaattaagtgttctactagccagactcacaataaataaattcagcgaaaac
cataagaacattggtaagaaaatagaagctgaaaatgacaaaaagttaagtctaaataag
caaatcacagaaaaggaggcctctttagagaaagctaagtctgaaatgatcctgaaagaa
aaggctctttccgcaagacaaaagaccctcaatgagcatgttaacaagatccgtcagtat
gagagtgagaaaaagatcaagaatgagcgcctgagatttttaaatgacaaatctgatagt
ttgaaggatcagatagagctagatagaaaaagtaatgaacgggctaaatttagtctagaa
ggactaggccaggaaaaaggagccgctgagaaaattctggccgaaattgaaatgaagctg
aatggcctgaaagaagattatgatgctcagaaaattaaaacagccgatcttcaggctcag
gttgatgacattcgaaagactcaaaaaaacaagcaagaagaggtttatcagcttaaaaag
tctgtagaaataaaggaacttcaattaagctcacttaagcaagagcttgaaaaaactgcc
agcgacacaaatcagcagagtgctagtttggtagaatttgatcagaaagtttcatcctta
tctgaacagctgaatgtaaaaaacaatcttcaggaaaaacttaaaagagaagaatctgat
ttacaggcaaggattgagtccactgagaagaccattgaagtaattagggaagagttaacc
cagactaaccgtaagctggatgccaaacaaaacgagtataacttaacaaagtcattggtt
gaaagccttgaaggttttcctgaagctattaaattccttaaaaagaaggctcaatggaat
aaaaacgcccctctcctttctgacattcttacctgtgaagataaatacagagtaactatt
gagaattacctggagccataccttaattattacatcgtagaaaaagaggaagatgcgtat
gaagctattaatatattaagtgatgctgccagaggtaaagccaatttctttattctaaaa
gcatttgaaaacttcactccttcaggtaccagtttatatagcaatgcttttcctgctact
gaaatcatggaatatgatagtaagtacagaaagcttatggggcatattcttgacaaagta
tatattctagaaggagattataatagtattccaaaagatgatgacaacatattcatcact
cagagcggtaaggtaacaagaagaagatacagtatttctggtggatcagtaggtttattt
gaaggaaagaaaataggtagagctaaaaaccttgaaaaacttgacaaggagataaaacac
ctcagtaaaaaacttagtgaaatagagcaaagccatagtgaaaagcagaaggaacttgag
aagttaaaaagcagcactaaaagggatgaccttgaagagttaagagaggaagtaaaactc
atcaacgaagaatacatctcaataaaaaccaagcaagagcagtttagcaagatgctttct
gacgcagatatgcgcaaggaagatatcatggataaaattgaagagctaagagaacagata
gaagaagataaaccaaaggctgaaaatgaggagaaatggcagcttgaaaaagaaattcag
ctaaaccagtcatccactgaactgcatgagcagagcgagattttatctcagaaatcatca
gctttcaatgaacaaaacatcttatttcaccagcaggacaataaggtaaaaagtctggaa
caagaaattgagtataagacagatacctttgaaaatagtaaacttcgaattgagaaaaat
caggttgagttaaaggaaaacgaatccgaaataaaacaactccttgaaaaagcagagact
agtgatgatgagcttatttctatgtatgaagaaaaagaaagcatagaaaccggtgtcaat
gaggcagaacgagaatactatgatgtacgtgctcagatagatgacgctgataaagcaacc
agagagattcaacgtaatcgagagagtattgacactattctcatggaattacaaaactca
ctcaatgaaacaaaaatccagttaaattctgtaaaagaacgcctttcagtagagttcaat
attaaagttgatgagatcatggatgaggctcctgaagaggaagtggaaccagaagaactg
aggcaaagagtagaaaagataaaagataagcttgacaaaatggggcctatcaacccaatg
gccatggaagcttatcaggaaataaaagaaagaaacgattttattaccacgcaaagagag
gatttatttaatgcgaaagaatcattactcactaccattggagaaatagatgctgtagcc
aaagaaactttcatcgaagcgtacgaaaagatcaaagaaaacttcgttaaagtatttaga
agtctctttactgaagaagatgattgtgatttaagactcagcgacccggataatccgctg
gaatctagcatagaaattattgctaaaccaaaaggtaagaggccattaactatcaaccag
ctttcaggaggagaaaaaactttaacggctacctcactcctattctctatttacctgttg
aagccagcaccattctgtatattcgatgaggtagatgctcctttagatgacgctaacatt
gataagttcaataacattatcaaaaccttctctaaagagtctcaatttataattgtaact
cacaacaaaaggacgatggccagcaccgacgttatttatggaattaccatgatagaacaa
ggtgtttctcgagtaattccggtagatctacgcgagcttgcagattag
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