Fulvivirga ligni: LVD16_22325
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Entry
LVD16_22325 CDS
T09288
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
flw
Fulvivirga ligni
Pathway
flw00730
Thiamine metabolism
flw01100
Metabolic pathways
flw01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LVD16_22325 (thiC)
Enzymes [BR:
flw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LVD16_22325 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UII20581
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Position
complement(5286995..5288866)
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AA seq
623 aa
AA seq
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MRGTDKTPGAESITRDPFPKSRKIYVPGKLHDIQVAMREITLSDTTARFSPEAPVEKNPP
VTVYDTSGPYTDPEVDIDVKKGLPKLREQWIADRADTEMLSGISSEYGKQRLNDSKLDDL
RFSYLKNPLRAREGENVTQLHYARQGIITPEMEYIAIRENQRIEQWNHLNAQHPGESFGA
NTPKELITPEFVREEVAKGRAIIPANINHPEAEPMIIGRNFLVKINANIGNSVVTSSIEE
EVEKAVWACHWGADTIMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVNGKAEDLT
WEIFRDTLIEQAEQGVDYFTIHAGVRLKYVPLTAKRVTGIVSRGGSIMAKWCLAHHKESF
LYTHFEEICEIMKAYDVSFSLGDGLRPGSLADANDMAQFAELETLGELTKIAWKHDVQVM
IEGPGHVPMHMIKENMEKQLEACDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCA
MLCYVTPKEHLGLPNKKDVKDGVITYKIAAHAADLAKGHPGAQYRDNALSKARFEFRWED
QFNLSLDPDTASQFHDETLPAEGAKVAHFCSMCGPNFCSMKITQDVRDFAKENNLTDESA
LEKGMKEKAAEFNEKGGEIYLEQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaactgacaaaactccgggcgcggagagtataacccgcgatccttttcctaaa
tcccgaaaaatttatgtgccgggtaagctacatgatattcaagtggccatgcgtgaaatc
acgttaagcgatactacggccagatttagccctgaggcaccggtagagaagaatcctccg
gtaacggtttatgacaccagcggaccatacactgatccagaagtggacatagatgtgaag
aaagggcttcccaaactcagagagcagtggatagcagatagggctgacactgagatgctt
agcggtatttcttctgagtatggcaagcagagactcaatgatagtaagctggatgatctg
cgattttcgtacctaaaaaatccattgagagcgagagaaggtgaaaatgttactcagctt
cactatgccaggcaaggcatcatcacgccggagatggagtatatagctatcagggaaaat
cagcgtattgagcagtggaatcacctgaatgcacaacatccgggagaaagctttggagca
aatacgcccaaagaactgatcacgccagagtttgtgcgtgaagaagtggcaaaaggaagg
gccattattcctgccaatatcaatcatccagaggcggagcctatgatcattggaagaaac
tttctggtaaaaatcaatgccaatattggtaattccgtggtcacttccagcatagaggaa
gaagtagaaaaggcggtttgggcttgtcactggggtgccgataccattatggacctttct
accggtaagaatatccatgaaacacgagaatggatcttaagaaattcaccagtgcccatt
ggtactgttcctatctatcaggctttggagaaggtgaatggtaaggcggaagatctcacc
tgggagatatttagagatactttaatagagcaggccgagcaaggggtggactatttcacc
attcacgctggcgtacgacttaagtatgtgccgctaaccgccaaaagagtgacaggaatt
gtgtccagaggtggttctatcatggccaagtggtgcctggcgcatcataaagagagtttt
ttatatactcactttgaagagatctgtgaaatcatgaaggcatatgatgtgtctttctcc
ttgggagatggtctaaggccgggttctttggctgatgccaatgacatggcgcagtttgcc
gaactggaaacgttaggtgagcttaccaaaatagcctggaagcatgatgtacaggtaatg
attgaaggcccaggtcatgtgccgatgcacatgatcaaggagaatatggaaaagcagctg
gaagcctgtgatgaagctcctttttatactttaggcccgcttacaacagatattgctcct
ggttacgatcacattacttcaggtattggagccgccatgattggctggtatggttgtgct
atgctttgctatgttacacccaaagagcacctgggcttacccaataagaaggatgttaaa
gatggtgtaatcacttacaaaatagcggcgcatgcggcagatttggcaaaaggacatccg
ggagcgcagtatagagataatgccctgagcaaggccaggtttgaattcaggtgggaagac
cagtttaacctttccctggatccagatacggccagccagtttcatgatgaaacactacca
gccgaaggagccaaagttgctcatttctgcagcatgtgtgggcctaatttctgctctatg
aaaattactcaggatgtgcgtgattttgccaaagaaaacaatctgactgatgagagtgca
ttagaaaaaggtatgaaagaaaaggccgctgaattcaatgaaaaaggaggcgaaatttat
ctggaacaatag
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