Fulvivirga ligni: LVD16_22345
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Entry
LVD16_22345 CDS
T09288
Name
(GenBank) mechanosensitive ion channel family protein
KO
K16052
MscS family membrane protein
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
flw02000
]
LVD16_22345
Transporters [BR:
flw02000
]
Other transporters
Pores ion channels [TC:
1
]
LVD16_22345
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Msl2-3_C
MSL2_3
Halogen_Hydrol
Motif
Other DBs
NCBI-ProteinID:
UII20585
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Position
complement(5292345..5294114)
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AA seq
589 aa
AA seq
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MAPSIPFKTYILSFFLLLISVFNTQAQIFQQANTQDENKDTEIPADSLGRRSPQGTVNGF
MDAVSQYKYKRAIGYFDLKGGFEDQEEAIDLVKSLIIMLDQGGTIFPNAWISDKQSGSRD
DGLQADLDRVGRISANGKSFDLILRKQNDSDGFPVWRFSTETLQNIASVKDDFKDPLINR
FMPSFLDNKNRFGFAAGQWLAIMFIVALSYFLAVWLSKGLVFFVKKVWKKARTAPTEGII
DAFSLPLRLYLTIALYLKVSQMIGISVIVRQQFSYVTVIVFWAAVLLLVWRIADFITRFS
EDRMSLRGNLAAVSAIMFLRRAFYIAIIITGIILTLSTLGFDITTWLAALGIGGIAIALG
AQKTVENFVGSVTLVLDRPIRVGDFCKVSDTTGTVEQIGMRSTKIRTLDRTIVTIPNGEF
SSLKIENYTQRDMFWFHPVLSMRYETTPDQMRYLLVEIRKLLYAHSRVEPDPARIRFTGF
GADSLPLEIFAYVKAVDFNEFLGIKEDLLLRIMDIVEESGTGFAFPSQTIYMAKDEGVSP
EKAEKIKAKVDEWRKQGIMEIPAFDPETIDALKGSIEFPPEGSSQREKE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttcaattcccttcaaaacatatattttatcattcttcctgcttttgattagt
gttttcaacacgcaagcacagatttttcaacaagcgaatacccaggatgagaacaaggac
actgaaatacctgctgattctcttgggcgtagatctccgcagggcacggtgaacggcttt
atggatgctgtttctcagtataaatataaaagggccattggctacttcgatctgaaagga
ggattcgaggatcaggaagaggcgatagacctggttaaaagtcttattatcatgctagat
caaggcggcaccatatttcctaatgcatggatcagcgataaacaatcggggtccagagac
gatggacttcaggcggatttggatcgtgtaggccgcattagtgccaatgggaagagcttt
gatctgatattaagaaaacaaaatgattcagacggatttccggtatggcgcttcagtaca
gaaacgcttcaaaatattgcctcagtaaaagatgacttcaaggatcctttaatcaacagg
ttcatgccgtcattccttgataataaaaatcgctttggtttcgctgcgggtcagtggctg
gctattatgtttattgtggccttatcttactttttagcggtttggttatcgaaagggctg
gtattttttgtgaaaaaggtttggaagaaagcacgtacagcccccacagaaggtattatt
gatgcttttagtttgcccttaagactttacttaactatagcgctatatcttaaggtgtct
caaatgataggaatttctgtcattgtaagacagcaatttagctacgttacggtgattgtg
ttttgggctgcggtactactattggtatggagaattgctgactttatcacccgttttagt
gaagatagaatgagtctgagggggaatctggcagcggtaagtgctattatgttcttaaga
agagcattctatattgccataattattacaggtatcatactcacgcttagtactttaggg
tttgatatcaccacatggttggcagcgttaggcattggaggtatagccatagccttggga
gctcaaaaaacggtggaaaatttcgtaggtagtgtcaccctcgttctggacagaccaata
agagtaggagacttctgtaaggtgtccgatactacaggtaccgtggagcagattggcatg
cgctctacaaagatcagaacgcttgatagaactattgtcactattcctaatggtgagttt
tcatcattaaaaattgaaaattacacccagcgagatatgttttggtttcaccctgtactt
tctatgaggtatgaaactacacccgatcagatgcgatacctgttggtggaaattagaaaa
ttgctttacgctcattccagagtagagccagatcctgccagaatcagatttaccggattt
ggagccgattcattgccgcttgaaatttttgcttatgtgaaagcagttgatttcaatgaa
ttcctgggaattaaggaggatttgttgctccgtattatggatattgttgaggagagtggt
actggatttgccttcccgtcacagacaatctatatggctaaggatgagggtgtttcacct
gaaaaagcagagaaaattaaagccaaagtggatgaatggcgcaagcaggggatcatggaa
atacctgcatttgatccggaaaccattgacgctttaaagggaagcatagagtttcctccg
gaaggctctagccagagagaaaaagagtaa
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