Fulvivirga ligni: LVD16_23330
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Entry
LVD16_23330 CDS
T09288
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flw03016
]
LVD16_23330
Enzymes [BR:
flw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LVD16_23330
Transfer RNA biogenesis [BR:
flw03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LVD16_23330
Prokaryotic type
LVD16_23330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
UII20778
LinkDB
All DBs
Position
complement(5514746..5515663)
Genome browser
AA seq
305 aa
AA seq
DB search
MSFELKILGSNSATPAYGRHHTAQLLKIRAHNFLIDCGESTQTQLTRYKCKTIRINHIFI
SHLHGDHYLGLMGLIFTLHLLQRKDDLYIYGQRGLQEIITTQLKYSDTSLNYKIHFHELR
TDKPELIFEDKYLTVESFPLNHRIACCGFIFKEKPKPIRLNKEKLPENLTLAQIGTLKKG
EDVYNEAGELIYKNSDLTLPPRESRSYAYCSDTKYDESIIPIIKGVDLLYHEATFLQEKA
FWAEQTFHSTTEQAAGIAKAAQVKQLLIGHYSARYKDLTPFLEEAKSVFDNTYLATEGES
IHIPE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttgtcattcgaactaaaaatacttgggtctaattcggcaacgcctgcatatggcaggcat
catactgcccagcttttaaagattagagcgcataattttctgatagactgtggtgaatct
actcaaacccagcttaccaggtataaatgcaagaccattcgtattaatcatatctttatc
agtcacctgcatggtgatcattatttaggacttatggggctcatctttactttgcacctg
ctgcaaaggaaagatgacctttatatttacgggcagcgtggtcttcaggaaatcataact
acgcagctgaaatattctgatacttctctgaattataaaattcattttcatgaattaaga
acggataagcctgagctaatttttgaagataagtacctcacggtggagagctttccattg
aatcatagaatagcatgttgtggatttatattcaaagaaaagcctaaacctattcggtta
aataaagagaagctacctgaaaaccttacactcgcacagataggtacgttgaaaaaaggt
gaggatgtctataacgaagctggtgagttaatctataaaaacagcgatttgactttgcct
cccagagaaagtagatcatacgcttactgctcagatactaagtatgatgaaagcataatt
cccattatcaaaggggttgacctgctgtatcatgaagccacgtttttacaggaaaaagct
ttttgggcagagcaaacttttcatagtaccacagagcaggcagcgggtattgccaaggct
gctcaagtgaagcagctgctgattggacattattccgctcgctataaagaccttacgcca
tttctggaagaggctaaatctgtgtttgataatacttacctggccacagaaggtgagtct
atacacatacctgaatga
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