Fulvivirga ligni: LVD16_23420
Help
Entry
LVD16_23420 CDS
T09288
Name
(GenBank) PAS domain-containing protein
KO
K13924
two-component system, chemotaxis family, CheB/CheR fusion protein [EC:
2.1.1.80
3.1.1.61
]
Organism
flw
Fulvivirga ligni
Pathway
flw02020
Two-component system
flw02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LVD16_23420
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
LVD16_23420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
flw02022
]
LVD16_23420
02035 Bacterial motility proteins [BR:
flw02035
]
LVD16_23420
Enzymes [BR:
flw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.80 protein-glutamate O-methyltransferase
LVD16_23420
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.61 protein-glutamate methylesterase
LVD16_23420
Two-component system [BR:
flw02022
]
CheA family
CheA-CheYBV (chemotaxis)
LVD16_23420
Bacterial motility proteins [BR:
flw02035
]
Flagellar system
Chemotaxis proteins
Two component system proteins
LVD16_23420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CheB_methylest
CheR
HATPase_c
PAS_10
Response_reg
PAS_3
PAS_9
PAS_4
HisKA
GAF
CheR_N
GAF_2
PAS
GAF_3
HATPase_c_2
DUF745
PAS_11
DUF1664
Mod_r
HAUS-augmin3
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
UII20794
LinkDB
All DBs
Position
5533954..5538510
Genome browser
AA seq
1518 aa
AA seq
DB search
MPSSQNPLIIGIGASAGGLKALQKFFDSVPVDLPIAYFVIQHLDPNHSSMLSELLGKNTM
LKVVDASDNTSISSGHVYIIPPAKYMEISSSMIRITPKKELTGKRTAIDHFFRSLARQCG
EKCVGIILSGSGSDGTAGLREIKAAGGLTLAQNPQSAEHQGMPKSAIQAGAIDKVALVEE
MPSLLLNYIKHPLALKEEKQLVDKISNNTLERVTEILAIHEKFELSQYKPNTIYRRITRR
MSLTGFKDYYDYIQELERNADERKQLTEDLLINVTDFFRDKEAFEVLQKQVIPDIIKKVD
KGEDIRVWVAGCASGEEAYSIAIVILEAIEKHNIKNELKIFATDIDEGAIKLARKGVYPS
SIIKEIPENYIGKYFIDQGNGTYQIKSTVRDLISFAHQNVASHPPFSHMHLISCRNLLIY
VRRKVQEKILNAFYFALEGDSFLFLGSSETISNKTDFFRSVSKKWRIYRKIPGRDKETLL
LHHLHLEKNSPPTLSIPSYSVRKSKDELSSRIDLMRIALLDAQLSASVIIDESGEILYYH
GNLKPFMNFPMGEPQNNIMQLIHSDIRSRLRGCLYKLRKNGQKQIFHCSLAIREEPNTQS
EIIVKLSILPNQKFTEGQAILITFTESSEIIKDRIDLPSEEEQNINRSLEIELSETKEEL
QNTIEELESSTEELKASHEEALSTNEELQSANEELEAGSEELRSLNEELSTVNNQLKEKI
ELLQQTNNDINNFFSSTDIPTLFLNTKLEIQRYTPATENLLKIGSQDIDRPISSLGRDLV
DDNLVEECHKVLKNFQPIQKEKAGPDDKWYIRRITPYRTEELKIEGVVISFQDITEVKQL
SKRAEARERQQLVVAQLGMMALEGAEPEEMMHQAIRQVAHVLNADYAKILKYQPEEHNLL
LIAGTGWNPNSVGHITVPDDYNSQAGYTLLSKEPIIVKNLSEEKRFKGPELLLKHNVVSG
ISCLINHTKPPFGIIAVHTTTYREFTSEDAHFLQSVANMISTALKTREHQEKLHASEEQF
KTISNSIPQLAWIADPSGYVYWYNHRWYDYTGTSKEEMEGWKWKSVHKKEEVDRIIEKFK
LHINNEEEWEDTFQLRAADGTYRWFLSRAKPVKDKHGKVLSWLGTNTDISEHLELENSLR
NVIKELENTDQRKNEFLAVLGHELRNPLASLQAGIELLDTEQLPAKKIIDILGRSVSSIG
RLLDDLLDLSRISRKKIDLKPEIINISEHLNQCLTSLKGLMDQKKQTISVHINRGIYIYA
DPLRLEQIFVNILTNAHKYSHEGGKIHVDAWQEREAVYIKIEDNGIGIPVDKQEEIFKDF
YQIPQTGKAAAGLGIGLALVKHLVSLHKGEVRVESKGYGHGACFTLTFPAKQAPSNFEPN
KMKVHLAEENPKDAKIVLIEDNPDISLMMRMILETLTCEVFSANNGLDGTKLIIEEKPDI
SFIDIGLPDITGYEIAMRLRKKKYNGILLALSGYSHQAARVRSLESGFNDHLAKPLGKEQ
IVSIFRKYIWNQLQATST
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgccttcatcacagaacccattgatcattggaattggcgcctcggcaggaggactaaaa
gccttgcagaaattttttgatagtgtgcctgttgatttacctattgcctattttgtaata
cagcatttggatcctaatcattcaagcatgttgagtgaattacttggaaaaaatactatg
ctaaaagtggttgatgcttctgataatacatctatatctagcggccacgtatatattatc
cctccagcgaaatatatggagataagttcaagtatgataagaataacgccaaagaaagaa
ctaacagggaaacgtacagcaattgatcacttttttagatctttggcacgtcaatgtggt
gagaaatgtgtaggtatcattctttcgggatctggaagtgatggtactgcgggtttaagg
gaaattaaagctgccggggggttaacattagctcaaaatccacaatcagccgagcaccaa
ggcatgccaaaatcggcaatacaggctggtgcaatagataaggtagcattagtagaagag
atgccatcactcctactaaattatattaagcaccccctagcacttaaagaagaaaagcaa
ttagttgacaaaatatctaataatactttagaacgcgtaactgaaatactagctatacat
gaaaaatttgaattaagtcagtataagccaaataccatatatcgcagaatcactaggaga
atgagtttaactggctttaaagactattatgactacatacaagaattagaaagaaacgcc
gacgaacgaaaacaactgacagaagatctcctgataaacgtgacagatttctttagagat
aaagaagcctttgaggttttacaaaagcaggtgatacccgatattattaaaaaagtagat
aaaggggaagatattcgtgtttgggtggctggctgcgcgagtggagaagaggcttattcc
atcgccattgttatactcgaagccatcgagaaacacaatataaaaaatgaacttaagatt
tttgccaccgacattgatgagggcgctattaaattggcacgtaaaggtgtttatccttct
agcatcattaaagaaattcccgaaaactacattggtaaatactttattgatcaaggaaat
gggacttatcaaatcaaaagtacagtacgagatctgatttcttttgcacaccagaatgta
gcaagccaccctcctttttctcacatgcatctcattagttgtagaaatcttttaatatat
gtaaggaggaaggtacaagaaaagattctaaatgcattttattttgctctagagggtgac
tcatttctttttcttggtagctcagagacaatcagcaataaaactgacttttttagatca
gtatctaaaaaatggaggatatacagaaaaatacctggaagagataaagagaccttactt
ttacatcatcttcatttagagaagaatagtcctcccacattatctattccttcttattct
gtaaggaaatcaaaagatgagcttagttctagaattgatctaatgcgaatcgcacttttg
gatgctcaactttctgcttctgtaattatagatgaatccggggaaatattatattatcat
gggaacctgaagccctttatgaattttcctatgggtgaaccccaaaataatattatgcaa
ctgattcattctgatattcgatccagactcagaggttgcctttacaaactaagaaagaac
ggccaaaagcaaatttttcattgctcgctggctattagggaagaacctaatactcaaagt
gaaataattgttaaattaagcatattaccaaatcaaaagttcactgaaggtcaagccatt
ttaataacttttactgaatcatcagaaatcattaaagacagaattgatttaccaagtgaa
gaagaacaaaatattaaccgaagccttgagatagagctatcagaaactaaggaagaatta
cagaatactattgaagaacttgaaagtagcacggaggaactaaaagcttctcacgaagag
gctttatctactaatgaggaattacagtcagccaatgaagagctagaagcggggtcggaa
gaattaagatctttgaacgaagagttgagcaccgttaacaatcagttgaaagagaagata
gaattattgcaacagaccaacaatgatataaataattttttttccagcacggacatccct
accctgtttctgaatactaaattagaaattcagcgatatacacctgctacagaaaattta
cttaagataggcagccaagatatcgacaggccaatttcatctttaggtcgagatttagta
gatgataacttagtagaggagtgtcataaagtattaaaaaactttcagcctatacaaaaa
gaaaaagcaggtccagatgataaatggtatataagaagaattacaccatatcgtacggaa
gaattaaaaattgaaggtgtagtgatttcatttcaggatataactgaagttaaacagcta
tctaaaagagcagaagcccgagagcgtcagcaattagtggttgctcaattaggaatgatg
gcactagagggtgcagagccagaagaaatgatgcaccaagccattagacaagtggcacac
gtactgaatgcggactatgccaaaattttaaaataccaacctgaagagcataatttacta
ctaattgcaggtacaggctggaatccaaattcagtaggtcatatcacagtgccagatgat
tataattcacaggctggttatactttgctttcaaaagaaccaatcattgtgaaaaatcta
tcagaagaaaaacgctttaagggaccagaattactgctcaagcataatgtggtgagtggg
attagctgcctaatcaaccataccaagcctcctttcggaattattgcagtacacacaact
acctacagagaatttacatcagaggatgctcattttttgcaatctgtagctaacatgata
tcaactgcactgaagaccagggagcatcaagaaaaattacatgccagtgaggagcaattt
aaaaccatatccaactccatccctcaactggcctggatagctgatccttcaggttatgtt
tattggtataatcatagatggtatgactatacaggtacctccaaagaagaaatggaaggt
tggaaatggaaaagcgtccataaaaaagaggaagtcgatcgtataatcgaaaaatttaaa
ttgcatattaacaatgaagaggaatgggaagacacttttcaattacgtgcagccgacggt
acctatagatggtttttgtcacgagcaaaacctgtaaaggataagcatggaaaagtctta
agctggctaggaacaaacacggatattagtgagcatttagaacttgaaaactctcttcga
aatgtaattaaggaattagaaaatacagatcagagaaaaaatgagtttttagcagtatta
ggtcatgaacttcgcaacccactggcatctttgcaagctggaatagaacttttagacact
gagcagctgccagcaaagaagataatagacattcttggcagaagtgtgtcatcaatagga
cggttattagatgatttactggatttatctcgtatttcccgtaaaaaaattgatctaaaa
cctgagattattaacatcagtgaacacttaaatcaatgccttactagtttaaagggtctg
atggatcagaaaaagcaaacaatatcggtccatatcaatagaggtatatacatttatgca
gatccactccggctcgagcaaatatttgtcaacatactcactaatgctcataaatattct
catgagggtggaaaaattcatgtagacgcttggcaagagcgggaagctgtttatattaaa
attgaagataatggcattggtattccagtagataaacaagaagaaatttttaaagatttt
tatcaaatacctcaaactgggaaggcagcagctggtttaggtattggacttgcgttagtg
aagcatttagtaagtctgcacaaaggagaagtaagagtagaaagcaaaggttatgggcat
ggcgcatgttttactctcacttttcccgccaagcaagccccttctaattttgaaccaaat
aagatgaaagttcacttagcggaagaaaacccgaaagacgcaaaaatcgttcttattgaa
gataatccggatatttctctgatgatgagaatgatattagaaacattaacctgtgaggtt
tttagcgccaataatggtttggatgggactaagctaatcatagaagaaaaaccagatatt
tccttcatagatattgggttgccagatattacaggttatgaaattgccatgaggctgaga
aaaaagaaatataatgggattctccttgccttatcaggatacagccaccaggcagcgaga
gtaaggtcattagagtctggttttaatgatcatctagctaaaccattgggaaaggaacaa
atagtatcgatttttagaaagtatatatggaatcagctgcaggccacatcaacttaa
DBGET
integrated database retrieval system
