Fulvivirga ligni: LVD16_24305
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Entry
LVD16_24305 CDS
T09288
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flw03016
]
LVD16_24305 (truB)
Enzymes [BR:
flw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LVD16_24305 (truB)
Transfer RNA biogenesis [BR:
flw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LVD16_24305 (truB)
Prokaryotic type
LVD16_24305 (truB)
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
UII20971
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All DBs
Position
5743494..5744156
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AA seq
220 aa
AA seq
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MDNQQPEGSVILIDKPLEWTSFDVVKKLRYALKVKKIGHAGTLDPLATGLLILCTGKMTK
QIEKYQGQEKEYTGKFYLGKTTPSYDLETEVDSETSIDHLTSDQIHRATEAFTGIIEQTP
PIYSAIKVDGKRAYEGARKGEEVKLKSRNVEVKSFEITAIDLPEVHFKIICSKGTYIRSL
AHDFGQSLGVGAYLSELRRTRIGDFKVEDAQTIEEATKRE
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggataatcaacaaccggaaggttctgtcatactcattgacaaaccattagaatggaca
tcttttgatgtagtgaaaaagcttagatatgccctaaaggttaaaaaaattgggcatgcc
ggtactctagacccattagccacaggattactcatcttatgcactggtaaaatgactaag
caaatagaaaagtaccagggacaagaaaaagaatacactggtaaattctatttaggaaaa
accaccccttcttatgatcttgaaactgaagtggatagtgaaacttctattgaccattta
acatctgatcaaatccatcgggccactgaggctttcaccggaattatagagcaaacccca
cctatctactctgcaattaaagtagacggaaaaagagcttatgaaggagcacgtaaggga
gaagaagtgaagcttaaatcacgaaatgtagaagttaaatctttcgaaattactgctatt
gacttgcctgaagtgcattttaagatcatatgttctaaaggcacatatataagaagttta
gctcacgactttggtcaatcacttggagttggcgcttatctctccgaacttcgcagaaca
agaatcggcgatttcaaggtagaagacgcccaaacaattgaagaggcaacaaaaagggaa
tga
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