Fulvivirga ligni: LVD16_26285
Help
Entry
LVD16_26285 CDS
T09288
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
flw
Fulvivirga ligni
Pathway
flw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LVD16_26285 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
flw01007
]
LVD16_26285 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
flw03016
]
LVD16_26285 (aspS)
03029 Mitochondrial biogenesis [BR:
flw03029
]
LVD16_26285 (aspS)
Enzymes [BR:
flw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LVD16_26285 (aspS)
Amino acid related enzymes [BR:
flw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LVD16_26285 (aspS)
Transfer RNA biogenesis [BR:
flw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LVD16_26285 (aspS)
Prokaryotic type
Other AARSs
LVD16_26285 (aspS)
Mitochondrial biogenesis [BR:
flw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LVD16_26285 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UII21345
LinkDB
All DBs
Position
6182097..6183842
Genome browser
AA seq
581 aa
AA seq
DB search
MLRTHTCGELRINDINTDVVLCGWVQRVRNKGSVIWVDLRDRYGITQLIFEEGHTEAAIL
EIANKLGREFVIKASGKVIERLSKNDKIDTGEIEVKVSALEVLNESKTPPFTIENDTDGG
DDLRMKYRYLDLRRTNVRENLLLRHRMMQATRAYLDAQKFTEVETPVLIKSTPEGARDFV
VPSRMNPGEFYALPQSPQTFKQLLMVSGFDRYFQIVKCFRDEDLRADRQPEFTQIDCEMS
FVEREDIISTFEGMVKHLFKTVKGIDITEIDRMSYDDAMKYYGSDKPDTRFDMKFTELND
LAQGKGFNVFDSAELVVGICAKGCSEYTRKQVDALTDFVKRPQVGAKGLVYVKCNADGSF
KSSVDKFYSQEDLKAWADAMGAEAGDLLLVLSGDKDHTRKALNELRLHMGSELGLRDKNV
YKVLWVLNFPLLEWDEDTQRYHAMHHPFTSPIPEDLQKLESDPGVVKANAYDMVINGVEV
GGGSIRIHDKEIQQRMFKQLGFSDEEAKAQFGFLMDAFEYGAPPHGGIAFGFDRLCSLFG
GSDSIRDFIAFPKNNAGRDVMIDSPSPIHADQLKELGIDLK
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaacacatacttgtggtgaattaagaataaacgacataaatacagatgtagta
ttatgcggctgggttcagcgcgtaagaaataaaggtagtgtaatatgggttgatttgaga
gatcgctacggtattactcagttgatctttgaagaaggccacactgaagctgctattctt
gaaattgccaataagctagggcgtgaattcgtaattaaggcatctggaaaggttatagaa
agactttcaaaaaatgataagatagacaccggagagattgaagtgaaagtttctgctctg
gaggtgcttaacgaatctaaaacacctcctttcaccatagaaaatgatactgatggcggc
gatgacctaagaatgaagtatcgctacctggacctaagaaggactaacgtaagagaaaat
cttttacttagacaccgcatgatgcaggcaacacgcgcttacttagatgcccagaagttt
actgaggttgaaacgcctgtacttataaaatctacacctgagggtgctcgtgactttgtg
gttccttcaagaatgaatccgggcgagttttatgcattaccacagtcaccacaaactttt
aagcagttgctaatggtttctggtttcgatagatatttccagattgtaaaatgctttaga
gatgaggacttaagagctgatagacagcctgagttcactcagatagactgtgaaatgtct
ttcgtagagagagaagacattatcagcactttcgaaggcatggtgaagcaccttttcaaa
accgtaaagggtattgatatcaccgaaattgatagaatgagctatgatgatgccatgaaa
tactatggatcggataagccagatactcgtttcgatatgaaatttactgagctgaatgat
ctggctcaaggcaaagggtttaatgtttttgatagcgctgagttggtagtgggtatttgt
gctaaaggatgctcagaatataccagaaagcaagttgatgcgcttactgactttgtaaag
agaccacaagtaggagctaaagggttagtatatgtaaaatgtaatgctgacggctcattc
aaatcatcagtagataaattttatagccaggaagatttaaaagcatgggctgatgctatg
ggagcagaagcaggtgatcttttgctagtacttagtggtgataaagaccacaccagaaaa
gcactaaacgagcttagacttcacatgggtagcgaacttggccttagagacaagaatgta
tacaaagtgctttgggttcttaatttccctcttttggagtgggatgaggacactcaaaga
tatcatgctatgcaccacccatttacctctccaattccagaggatttacaaaaactcgaa
tctgatcctggtgtagttaaggctaatgcctatgatatggtaatcaatggtgtagaagta
ggtggtggatcaatcagaatccatgacaaagaaatacagcagcgcatgtttaagcagcta
gggttctctgatgaagaggcaaaagctcaatttggcttcttaatggacgctttcgaatat
ggagcacctccacatggtggtattgcatttggttttgacaggctatgctcacttttcggc
ggttctgacagcatcagagactttatagccttccctaaaaataatgcaggtagagatgtg
atgatagactcccccagccccattcatgcagatcaactgaaagaattaggcatagactta
aaataa
DBGET
integrated database retrieval system
