Fulvivirga ligni: LVD16_27370
Help
Entry
LVD16_27370 CDS
T09288
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
flw
Fulvivirga ligni
Brite
KEGG Orthology (KO) [BR:
flw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
flw03009
]
LVD16_27370
Ribosome biogenesis [BR:
flw03009
]
Prokaryotic type
ribosomal protein modification factors
LVD16_27370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
UII21552
LinkDB
All DBs
Position
complement(6471049..6472383)
Genome browser
AA seq
444 aa
AA seq
DB search
MMSDLLTPIRRLTDTLPYLLDPKVGIITGLSEHPLEIDSPSFFRFNGSAANTEAFGEYRN
FAIGGGAATSRELALAKTVGECVERYCAAIYDKQQFPLFTYNEAPFKCVHPKDFALYSAE
QYIHPEFDFDEFTTDSPVRWIEALNMDSQEPMWIPASMVFVPYFFYQNGDETPIIQPISS
GLSCHCSFEEAVIGGICEVIERDDFMITWQAQLSRTKITKSSLSKSNQDLVARFEKVGYE
IHLMDISNETGIPGILAVAVGSKTDFVPLVVAASVALSPEEAVRKALEELAHTERYAYQI
KYELPRLQAHPEYDNVLGQVHHVNFWMNPAVRKHAEFLYSSDQYIDFGELKDFSKSNPLE
EMKEVVSVINASGYEVLITDITTSDIQSLGMKVVRAVIPGYHPLFMGYHKRALGGERLWT
VPQKLGFKGITKEEGDYPFPHPFP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatctattaacacctatcaggcggcttactgatactttgccttaccttctc
gatcctaaagtgggcatcattaccgggcttagtgagcatcctcttgagattgattcgcca
agtttttttaggtttaatggctctgcggccaatactgaagcttttggcgaataccgcaat
tttgccatcggtggcggtgccgctaccagccgggagctcgctctggcaaaaaccgttgga
gaatgcgtggaacgatattgcgcagctatttatgataagcaacaatttcctttgttcaca
tacaatgaggcgccattcaaatgtgtgcatccaaaagactttgccctgtacagtgccgag
caatatattcaccctgagttcgattttgatgagttcaccacagactcgccggtaaggtgg
atagaggcccttaacatggatagccaagagccgatgtggattcctgcatcaatggtattt
gttccctactttttctatcaaaatggtgatgaaactcctatcattcaacccatatcttca
ggtctttcttgtcattgttcttttgaggaggcagtgattggtggcatttgtgaagtgata
gaaagagatgattttatgattacctggcaggcacagctttccagaactaaaataacaaag
tcgtctttgagtaagagtaatcaggatttagtcgctcgctttgagaaagtagggtatgag
attcacctgatggatatttctaatgaaacaggtattcctggtattcttgccgtggctgtt
ggctctaaaacggattttgtgcccctggtagtggcagcatcagtagcgctatcaccagaa
gaggccgtaagaaaggctctggaagagctggcacacactgagcgatatgcttatcagatt
aagtatgaactaccgcggttacaggctcaccctgagtatgataacgtgctggggcaagtg
catcatgttaatttctggatgaaccccgcagtaaggaagcatgctgaatttctctatagt
tccgatcaatatattgatttcggtgagctgaaagatttttcaaaaagtaatcctttagaa
gagatgaaagaggtggtctctgtaatcaatgcttctggttatgaggtgcttattacggac
attaccacttcagatattcaaagccttggtatgaaagtggtcagggccgtaattcccggg
tatcatcctttattcatgggatatcataagcgtgctttaggcggagaaagattatggact
gtgcctcagaaactcgggtttaaaggtatcaccaaagaagaaggcgactatccttttcct
catccttttccttaa
DBGET
integrated database retrieval system
