Flavobacterium sp. YJ01: P0R33_04725
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Entry
P0R33_04725 CDS
T11516
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fly Flavobacterium sp. YJ01
Pathway
fly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0R33_04725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fly03019
]
P0R33_04725
03009 Ribosome biogenesis [BR:
fly03009
]
P0R33_04725
Enzymes [BR:
fly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P0R33_04725
Messenger RNA biogenesis [BR:
fly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P0R33_04725
Ribosome biogenesis [BR:
fly03009
]
Prokaryotic type
rRNA helicases
P0R33_04725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Motif
Other DBs
NCBI-ProteinID:
WET03639
LinkDB
All DBs
Position
1040741..1042654
Genome browser
AA seq
637 aa
AA seq
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MNKFEQLGLNESLLKAILDLGFENPSEVQEKAIPLLLEKDTDMVALAQTGTGKTAAFGFP
LIQKIDADNRNTQALVLSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITEQAREIK
RGAQIIVATPGRMQDMINRGLVNIKNIDYCILDEADEMLNMGFYDDIVSILSDTPDEKST
WLFSATMPQEVARIAKQFMSEPLEITVGAKNSGSSTVSHEFYLVNARDRYEALKRLADAN
PDIFSVVFCRTKRDTQAIAEKLIEDGYSAAALHGDLSQAQRDGVMKSFRGRQIQMLVATD
VAARGIDVDNVTHVVNYQLPDEIETYNHRSGRTGRAGKLGTSIVIVTKSELRKISSIERI
IKQKFEEKTIPSGIEICEIQLLHLANKIKDTEVDHEIDNYLPAINNVLEDLSKEELIKKM
VSVEFNRFIAYYKKNRDISTQSSDRRERGDSEPREFNNNGAVRYFVNIGSRDNFDWMSLK
DYLKETLDLGRDDIFKVDVKEGFSFFNTDPQHTDKVMDVLNNVQLEGRRINVEISKNDGG
GRRDHNNRGGGRNSGGPRREGNFAPRREGGFRGDRNSSRDGGSREGGFRNDRNSSAPRRE
GGFRSSAPRNENGGSDRAPRRSENFGDSSRPRRSRRD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttgaacaattaggattgaatgaatcgttactgaaggcgattttagatcta
ggatttgaaaatccgtcagaggtacaggaaaaggcgattcccctattattggaaaaagac
acagatatggttgcgttggctcaaacagggacagggaaaacggcagctttcggttttccg
ctaattcaaaaaattgatgccgacaacagaaatacacaagcattagttttatcgccaaca
cgcgagttatgtttacagattactaacgaacttaaaaactactcaaaatacgaaaaaggt
attaatgtggtagcagtttacggaggagctagtataacagagcaagcaagagaaataaag
agaggtgcacaaattattgtggcaactccaggaagaatgcaagacatgattaacagaggt
ttagtgaacattaaaaatatagattactgtattcttgatgaggctgacgaaatgttaaac
atgggattctatgatgatattgtatctattttatcagatactccagacgaaaaaagcaca
tggttgttctctgcaactatgccgcaagaggttgctagaattgcaaaacaattcatgagc
gaaccactagaaattactgtaggagctaaaaactctggttcgtctacagtttctcacgaa
ttttatttagttaatgctcgtgaccgttatgaagctttaaaacgtttagctgatgctaat
ccagacattttttctgtagttttctgtcgtacaaaaagagacactcaagctatcgctgag
aagttaattgaagatggatatagtgccgctgcgttacacggagatttatctcaagcgcaa
cgtgatggtgtaatgaaatcgttccgtggaagacaaattcagatgcttgttgctactgac
gttgctgcacgtggtattgacgttgataacgtaactcacgttgtgaactaccaattacct
gacgaaatcgaaacttacaaccaccgttctggtcgtacaggtagagcaggaaaattaggt
acttctattgtaattgttacaaaaagtgagttacgtaaaatttcttctatcgaaagaatc
atcaaacagaaattcgaagaaaaaacaattccgtctggaatcgaaatctgcgaaattcag
ttattacacttagcaaacaaaattaaagatactgaggttgatcacgaaattgacaactat
ttaccagcaatcaacaacgttttagaagatttatctaaagaagaattgattaagaaaatg
gtttcagtagaatttaaccgtttcattgcttattacaaaaagaacagagatatttctact
caatcttcagacagacgtgaaagaggtgattctgagccaagagaattcaacaataacgga
gcagttcgttatttcgtaaacattggttctagagataacttcgattggatgtcattaaaa
gattacttaaaagaaacattagacttaggtcgtgatgatatctttaaagttgacgtaaaa
gaaggattctctttctttaacactgatcctcagcatacagacaaagtaatggacgtttta
aacaacgtacaattagaaggtcgtcgtattaatgttgagatttctaaaaatgatggcgga
ggaagacgtgaccataacaaccgtggtggcggacgtaattctggcggaccaagaagagaa
ggaaactttgctccaagacgcgaaggcggatttagaggagacagaaattcttcaagagat
ggcggatcacgtgagggaggtttcagaaatgatagaaattcatctgctccaagaagagaa
ggtggttttagaagttctgctccaagaaacgaaaatggaggttctgatagagctccaaga
cgttcagaaaactttggtgatagctcaagaccaagaagatcaagaagagattaa
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