Flavobacterium sp. YJ01: P0R33_05340
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Entry
P0R33_05340 CDS
T11516
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
fly Flavobacterium sp. YJ01
Pathway
fly02024
Quorum sensing
fly03060
Protein export
fly03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
P0R33_05340 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
P0R33_05340 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
P0R33_05340 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fly02044
]
P0R33_05340 (secDF)
Secretion system [BR:
fly02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
P0R33_05340 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
WET03759
LinkDB
All DBs
Position
complement(1184639..1187629)
Genome browser
AA seq
996 aa
AA seq
DB search
MQNKGLIKFFAILFALVSIYQLSFTFVANGVKSEAKAFAGDNPDKELKYLDSIGKEKVLN
LDFTDFTYNEVKNKQLNKGLDLEGGINVILQISIKDVLKGLANNSKNPVFNKSLADASAN
LEGNKTYLNKFFEAFEANSKGSVKLASPDIFANRSLQGDGGVDFQMSDAQVQKVIKRKVD
ESVESAFKVLRERIDKFGVTQPNIQKLGETGRILVELPGAKDVDRIKKLLGGKAQLEFWE
TYKMEEIGNFLVAANEALKKTEVSKVETKTVAKDSLNALLTDAKDSADVKKGNNPLFDKI
VGNGGGPVLGYFATKDTAAINGYLKRPDIRVLLAADQHYAKFVWSKPTTIKDQKAKDLAT
AKDLEVVELYALKGNRDNNPAMSGGVVTDAKDTFDQMGKPAVSMQMNSQGAKVWEELTGR
AFAQKSYIAIVLDDIVYSAPGVTSGPIAGGRSEITGSFDVAETKDLANVLNAGKLPASAD
IIQSTVVGPSLGQAAIDAGTISSVLGFLLVCVWMVFYYGKAGWYANLALLLNLLFLFGIM
ASFGFVLTLPGIAGIVLTLGTAVDANIIIYERAKEELREGKSLSEAVAASYGWHGAMRSI
IDANVTHVLTGAILFIFGTGPIKGFALTLLIGIVTSLFTSIFIARIFIDRNIAGKADLTF
STNITKNWFTNFHFDFIKVKKFTYIFSSIVTVVSLVSIFFVNGLDEGVDFVGGRTFQVKF
EKAVDATAVSDELSAAFGTPVEAKILGDDDQLKITTKYKIKEDGVAIDEEVNQKLYAALQ
KYFPNTTYDKFINSFDGKKVGVLQASKVGASISEDIKTNSYWAVLGAMAVIFLYLMVSFR
KWQYSLGAIAAVAHDVIFVLGVYSLCYKFMPFHMEMDQHFIAAILTVIGYSMNDTVIVFD
RVREFIIGNRKGSFEDIVNASINTTLSRTLNTSLMMIIVLLTMFIFGGESIRGFIFAMLI
GIIVGTYSSLFIATPVLVDTISNDEKHTIEDKHNKA
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgcagaataaaggacttattaaatttttcgcaattctatttgcattggtaagtatttac
caactatcattcacttttgtggcaaatggcgtcaaaagtgaagctaaagcttttgcagga
gacaatcctgataaagagctgaaatatttagattctattggtaaagaaaaagtattaaat
cttgattttactgatttcacttacaacgaagtgaaaaacaaacagcttaataaagggctt
gacttagaaggaggaatcaacgttattcttcaaatttctattaaagacgtattaaaaggt
ttggctaataattctaaaaatccagtttttaataaatcattagctgatgcatctgcaaat
ttagaaggaaacaaaacgtatttaaataagttttttgaagcttttgaagcaaattcaaaa
ggttctgtaaaattggcttcgccagatatttttgctaacagaagtcttcaaggagatggt
ggagtagactttcaaatgtctgatgcacaagttcaaaaagttatcaaaagaaaagttgat
gagtctgtagaaagtgcttttaaagtattaagagagcgtatcgacaaatttggtgttaca
caaccaaatatccaaaaattaggagagacaggaagaatcttagtagagcttccaggtgct
aaggatgtggatagaattaaaaaattattaggtggaaaagcgcaattagagttctgggaa
acctataaaatggaagaaattggaaatttcttagttgctgctaacgaagctttaaagaaa
actgaagtttctaaagtagaaacaaaaactgttgctaaagattcattgaatgctttatta
acagatgctaaagattctgctgatgttaaaaaaggaaataatcctttatttgataaaatc
gtaggtaatggtggcggaccagttttgggttactttgctacaaaagatactgctgcgatt
aatggttatttaaaaagaccagacattagagttttattagctgctgatcagcattatgct
aaatttgtttggagtaaaccaactactattaaagatcaaaaagcaaaagatttagcaaca
gcaaaagatttagaagttgttgaattatatgctttaaaagggaatagagacaataaccca
gcaatgagcggtggtgttgttactgatgcaaaagatacttttgaccaaatgggtaaacct
gctgtttctatgcaaatgaacagccaaggtgctaaagtttgggaagaacttacaggtaga
gcatttgctcaaaaaagttatattgctattgttttagatgatatcgtatattctgctcct
ggtgtaacaagtggtcctatcgctggaggaagatctgaaattacaggttcatttgatgtt
gctgaaactaaagatttagctaacgtattaaatgcaggtaaattaccagcttctgcagat
attatccagtcaacggttgttggtccatctttaggacaagcggctattgatgcaggtaca
atttcttctgtattagggttcttattagtttgtgtttggatggtattctattatggtaaa
gctggttggtatgcaaaccttgctttattattaaatttactattcttattcggaattatg
gcaagttttggttttgtattaacattgccaggtattgcaggtatcgtattgacattaggt
actgcggtagatgcgaacattattatctacgaaagagcaaaagaagaattgcgtgaaggt
aagtcactttcagaggctgttgcagcttcttacggatggcatggagcaatgcgttctatt
attgatgctaacgttactcacgtattaactggagctatcttgtttattttcggaacagga
ccaatcaaaggtttcgcattaacattattaattggtatcgtaacttcattgtttacttct
atctttattgctagaatttttattgacagaaatatcgctggaaaagcagatttgactttc
tcaacaaatattactaaaaactggtttacaaacttccactttgatttcattaaagtgaaa
aaattcacttatatcttctcttctattgtaacagtagtaagtttagtttctatcttcttc
gttaacggattagatgaaggtgttgattttgttggaggtagaactttccaagttaaattc
gaaaaagctgtagatgctactgcggtttctgatgaattatctgctgctttcggtactcca
gttgaagctaaaattttaggagatgatgatcaattgaaaatcactactaaatataaaatt
aaagaagatggtgttgctatcgatgaggaagtaaaccaaaaattatacgctgcattacag
aaatatttcccaaatactacttacgataaatttatcaactcatttgatggtaaaaaagta
ggtgtattacaagcttctaaagttggtgcttctatctctgaagatattaaaactaactca
tactgggcagttcttggtgcaatggcagttattttcttatacttaatggtatctttccgt
aaatggcaatattcattaggtgcgattgcagctgttgctcacgacgtaatcttcgtatta
ggagtttattcattatgctacaaattcatgcctttccacatggaaatggatcagcacttt
atcgcagcgatcttaactgtaattggttattctatgaatgatactgtaattgtatttgac
agggtaagagaatttatcatcggaaaccgtaaaggtagtttcgaagatatcgtaaatgct
tctattaatacaacattatcaagaacattgaatacttcattaatgatgattatcgtatta
ttaacgatgtttattttcggtggagagtcaattagaggatttatcttcgcgatgttaatc
ggtattattgtaggtacttactcttcattatttatcgcaactccagtattggtagatacg
atttcgaatgatgagaaacatacaatcgaagacaaacacaacaaagcataa
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