Flavobacterium sp. YJ01: P0R33_07895
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Entry
P0R33_07895 CDS
T11516
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fly Flavobacterium sp. YJ01
Pathway
fly03030
DNA replication
fly03430
Mismatch repair
fly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P0R33_07895
03430 Mismatch repair
P0R33_07895
03440 Homologous recombination
P0R33_07895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fly03032
]
P0R33_07895
03400 DNA repair and recombination proteins [BR:
fly03400
]
P0R33_07895
Enzymes [BR:
fly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P0R33_07895
DNA replication proteins [BR:
fly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P0R33_07895
DNA repair and recombination proteins [BR:
fly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P0R33_07895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
DNA_pol_A_exo1
DUF7508
Motif
Other DBs
NCBI-ProteinID:
WET04248
LinkDB
All DBs
Position
1800821..1802194
Genome browser
AA seq
457 aa
AA seq
DB search
MKNTEYAIVDIETTGGNASGSRITEIAIIIHDGKNVLDRYETLVNPEQDIPPSIFGLTGI
NNEMVANAPIFDDISEKVLEMLTDRIFVAHNVNFDYSFVHHQLEQAGFKWSAKKLCTVRA
ARKIKPGLGSYSLGNLCNSLNISLENRHRAGGDADATALLFSLLLEWDDAGEIEKMIKKT
AQDQRLPPNLPPDDFNNLPDKPGVYYFYNQQRKVIYVGKAINLKKRVASHFSGNNINPQR
QHFLRDIHGISFEVCATELMALLLECTEIKKLWPTYNRALKRFEAKFGIYQYEARNGYKY
LAIGKVSKFQVCIHEFSSLYEGINLLRSLAERFEIDHRFCKYSKSEEGEFYPNNNVQSLP
DVIMHNTQIDNAIDYLLNNRPTFAIIDKGKSKEERSCVWIENGHFYGMGYLPSDISIHEP
SDVKNYVTPYKSNQYIEQLIFSYAEKHPRKVFFKNHF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacggaatatgctatagtcgatattgaaaccacaggcggaaatgccagtggc
agccgcattacagaaattgccattattattcatgatggtaaaaatgtactggatcgttac
gaaacacttgtaaatcctgaacaggacattcctccttctatttttggattaacgggcatt
aataacgagatggttgccaatgcgccaatttttgatgacatttcagagaaagttctcgaa
atgcttaccgatcgtatttttgtggcgcataatgttaactttgattattcattcgttcat
catcaactggaacaagctggttttaaatggtcggcaaaaaaactttgtaccgttcgtgct
gccagaaaaataaaaccgggattgggttcttatagtttaggaaatctttgcaattcttta
aatatttctttagaaaacagacaccgcgctggcggagatgccgatgccacagccttatta
ttttctcttttattagaatgggacgatgctggagaaatcgaaaaaatgatcaagaaaaca
gcacaagatcagcgtttacctccaaatcttccacctgatgattttaataatttacctgat
aaacctggagtatattatttttataatcaacaaagaaaagtgatttacgttggaaaagcg
attaatctgaaaaaacgtgtcgcttctcatttcagcggaaacaatattaatccgcaaaga
caacattttctacgagatattcacggaatctcttttgaggtctgtgctaccgaattaatg
gcacttttactagaatgcaccgaaatcaagaaactatggccaacttataacagagcctta
aaacgttttgaagccaaatttggaatctatcaatacgaagcccgaaacggttataaatat
ctcgctatcggaaaagtgagtaaatttcaagtctgtattcatgaattcagcagtttgtac
gaaggcattaatttgttaagaagtctggctgaacgctttgaaattgatcatcgcttctgc
aaatattcaaaatctgaagaaggagaattttatccgaataataatgtacaaagtctgccc
gatgttataatgcataacacacaaattgataatgcgattgattatctgttaaacaacaga
ccaacttttgctattatcgacaaaggaaaatcaaaagaagaacgcagctgtgtctggata
gaaaatgggcatttttatggcatgggatatcttccttctgacatttcgattcatgaacct
tcagacgtaaaaaattatgttacgccttataaaagcaatcaatatatagagcagttaatt
ttttcttatgcagaaaaacaccctagaaaagtattttttaaaaatcatttctaa
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