Flavobacterium sp. YJ01: P0R33_19675
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Entry
P0R33_19675 CDS
T11516
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
fly Flavobacterium sp. YJ01
Pathway
fly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P0R33_19675 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fly03021
]
P0R33_19675 (rho)
03019 Messenger RNA biogenesis [BR:
fly03019
]
P0R33_19675 (rho)
Transcription machinery [BR:
fly03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P0R33_19675 (rho)
Messenger RNA biogenesis [BR:
fly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P0R33_19675 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
AAA_25
NACHT
AAA_22
AAA
OB_RNB
Rho_N
Motif
Other DBs
NCBI-ProteinID:
WET01977
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All DBs
Position
4495707..4497554
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AA seq
615 aa
AA seq
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MFDISALKEMKLAELQEIAKLAKTIKINGVKKETLISQILAHQESTLAPAEAPQTAVVSE
SKEEKPKRARIAPAKTKAANTKNTPVLEFDKVEETVQKNDTPAPVEPIAETATEEVQANK
TPAAKKEPKIVKFNKSAYEKKVALNKEKVAANEVATEPVSETVSTEPVVSEPVAETAEKS
PVIAPVKKINPNQNKNQNPNQNQNQNPNQNQNQNGNGNGNGNHNNQNPNHKNKKSNNFRD
SDFEFDGIIESEGVLEMMPDGYGFLRSSDYNYLASPDDIYLSTSQIRLFGLKTGDTVKGV
VRPPKEGEKFFPLVRVLKINGHDPQVVRDRVSFEHLTPVFPSEKFKLAEKGSSVSTRIID
LFSPIGKGQRGMIVAQPKTGKTMLLKDIANAIAANHPEVYLIVLLIDERPEEVTDMQRSV
RGEVIASTFDREPQEHVKIANIVLEKAKRLVECGHDVVILLDSITRLARAYNTVQPASGK
VLSGGVDANALQKPKRFFGAARNVENGGSLSIIATALTETGSKMDEVIFEEFKGTGNMEL
QLDRKIANKRIFPAIDLTSSSTRRDDLLLDEKTLQRMWIMRKYLSDMNPVESMDFVNDRF
KKTKNNEEFLISMND
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatttctgcattaaaagaaatgaagcttgctgagcttcaagaaatagctaag
ttagctaaaacaataaagattaatggtgtcaaaaaagagactttaattagtcagatttta
gcacaccaagaaagtactcttgcgcctgcagaagctcctcaaacagctgtagtttctgaa
tcaaaagaagaaaaaccaaaacgagctagaattgcaccagcaaaaaccaaagcagcaaat
accaaaaatactcccgttttagaatttgataaagtagaggaaactgttcaaaaaaacgat
acacctgcaccagtagagccaattgcagaaacagcgactgaagaggtacaggcaaataaa
acaccagcagcaaaaaaggagcctaaaattgtaaaattcaataagtcggcatatgagaag
aaagtggctctaaataaagagaaagttgcggcaaatgaagtggcaacagaaccagtttca
gagactgtttcaacagaaccagttgtttctgagccagtagccgaaacagctgagaaatct
ccagtaattgctcctgtcaaaaagattaatcctaatcagaataaaaatcagaatccgaat
cagaaccaaaatcaaaacccgaatcagaatcaaaatcaaaacgggaatggtaatggaaac
ggaaatcacaacaatcaaaatcctaatcataaaaataaaaaaagcaataatttcagagat
tcagattttgaatttgatggaattattgaaagtgaaggtgttcttgaaatgatgccagac
ggttacggatttttacgttcatcagattataattatttagcttctcctgatgatatttat
ttatcaacttcgcaaatcagattatttggtcttaaaactggagatactgtaaaaggagtg
gttcgccctccaaaagaaggagagaagtttttccctttggttcgtgtgttaaaaattaat
ggacacgatccgcaagtagttcgtgatagagtttctttcgaacacttaacaccagtcttt
ccttcagaaaaattcaaacttgctgaaaaaggaagttcagtttcaactagaattatagat
ttgttttctccaattggaaaaggacaacgtggaatgatcgttgctcagccaaaaacgggt
aaaacaatgcttttaaaagatatcgcaaacgcaattgcggcaaatcatcctgaagtttat
ttgatagttttgcttatcgatgagcgtccagaggaggttactgatatgcaaagaagtgtt
cgtggtgaagttattgcttcaacttttgatagagaaccacaagagcacgtaaaaatcgct
aatatcgttcttgaaaaagcaaaacgtttggtagaatgtggtcacgatgttgtgattttg
ttagattctattacacgtttagcaagagcttacaatacagttcagccagcatctggaaaa
gtattaagtggtggtgttgatgccaatgcattgcaaaaaccaaaacgtttctttggagcg
gcaagaaatgtagaaaacggaggttctttaagtatcattgcaactgcattaacagaaacg
ggttctaaaatggacgaagttatcttcgaagaatttaaaggaactggtaatatggagtta
caattagatcgtaagatagccaataaacgtattttccctgcaatcgatcttacttcgtca
agtacacgtcgcgatgatttattattagacgaaaaaacacttcaaagaatgtggatcatg
cgtaaatatctttctgatatgaatccagtagaatctatggattttgtaaacgatcgtttt
aagaaaaccaaaaacaatgaagagtttttgatttcgatgaatgactag
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