Flavobacterium sp. SLB02: GIY83_02135
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Entry
GIY83_02135 CDS
T10548
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
flz Flavobacterium sp. SLB02
Pathway
flz00061
Fatty acid biosynthesis
flz00071
Fatty acid degradation
flz01100
Metabolic pathways
flz01212
Fatty acid metabolism
flz02024
Quorum sensing
flz04146
Peroxisome
Module
flz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
flz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GIY83_02135
00071 Fatty acid degradation
GIY83_02135
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GIY83_02135
09145 Cellular community - prokaryotes
02024 Quorum sensing
GIY83_02135
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
flz01004
]
GIY83_02135
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flz04147
]
GIY83_02135
Enzymes [BR:
flz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GIY83_02135
Lipid biosynthesis proteins [BR:
flz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GIY83_02135
Exosome [BR:
flz04147
]
Exosomal proteins
Exosomal proteins of breast milk
GIY83_02135
Exosomal proteins of breast cancer cells
GIY83_02135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QGK72908
LinkDB
All DBs
Position
complement(480947..482725)
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AA seq
592 aa
AA seq
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MVSITRLFDFPYYQQETYNLPVALATKKNGVWEKTSSQEYIAKANAVSRALLRIGVQKDD
KIALITSNNRTEWNIMDIGILQTGAQNVPIYPTIAEEDYEYILNHSGSIYCFVSDQEVLD
KVNAIKSNVPTLKEVYSFNEIAGCKHWTELLALGEDESNQNEVEARKDSIKTDDLATIIY
TSGTTGRPKGVMLSHQNIVSNVLDSAPRIPFDPGKSTALSFLPICHIFERMILYIYQFYG
VSVYFGESIDKISDNLKEVRPTVITAVPRLLEKVYDKIYAKGGELTGIKKKLFFWAIDLG
LKYEPYGANGFWYEFQLKIARKLIFSKWKEGLGGNLELMVSGSAALQPRLTRVFAAAEIP
VMEGYGLSETSPVIAVNDQRNRGFKIGTVGKVIRNVEVKIAQDGEILCKGPNVMLGYFKD
PEKTAEALQDGYFHTGDIGEIDSEGFLKITDRKKEMFKTSGGKYIAPQLIENAMKQSRFI
EQIMVIGDGEKMPAAFIQPNFEFVKEWAKLHKVTLGSTDASISENADVIKRIDEEVEKIN
EKFGHWEKIKRFELTPDVWSIDGGQLTPTLKLKRKIIKEIYKDLYAKIYGQN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaatcacacgcctttttgattttccctattatcaacaagaaacttacaacctt
ccagttgccttagcaaccaaaaaaaatggagtctgggaaaaaacatctagccaggaatat
attgcaaaagcaaatgctgtttcgagagcattattacgtataggcgttcagaaagatgat
aaaattgctttaatcacttctaacaatcgtaccgaatggaatatcatggatattggtatt
ttgcaaaccggtgcgcaaaacgttcctatttaccccactattgccgaagaggattacgaa
tatatattaaaccacagcggaagtatttactgttttgtatctgatcaggaagtacttgac
aaagtaaatgcgataaaatcgaatgtaccaacattaaaagaggtttactcgtttaatgaa
attgcgggatgcaaacactggactgagctattggcactgggtgaagatgagagcaatcaa
aacgaagtcgaagccagaaaagacagtatcaagacagatgatttggctaccattatttat
acctctggaacaacaggaagacctaaaggggtgatgctttcgcaccaaaatattgtgtcg
aatgttttagacagtgccccaagaattccgtttgatccgggaaaaagtactgcattgagc
ttcttgcctatttgccatatttttgaaaggatgattttgtacatctatcagttttatggg
gtttctgtttattttggagaatcgattgataaaatcagtgataacttaaaagaagttcgt
cctacagttattacagctgtaccaagacttttagagaaagtttacgataaaatttatgca
aaaggcggtgaattaaccggtatcaagaaaaaattatttttctgggctatcgatttaggt
ttaaaatacgagccatacggtgccaatggtttttggtatgaatttcagttaaaaatcgcc
agaaaacttattttcagtaaatggaaagaaggtttgggaggaaatctggaattaatggtt
tccggaagtgctgccttacaacctcgtttgacaagagtttttgctgctgccgaaattccg
gtaatggaaggttacggtttatctgaaacttctccggtaattgctgtaaatgatcaaaga
aacagaggtttcaagattggaactgttggtaaagtaattcgtaacgttgaagtaaaaatt
gctcaggatggagaaattctttgcaaaggaccaaacgtaatgttaggttattttaaagac
cctgaaaaaactgccgaagctctgcaggacggatattttcatacaggagatattggtgaa
attgacagcgaaggtttccttaaaattacagaccgtaaaaaagaaatgttcaaaacttcg
ggcggaaaatatattgctcctcaattgattgaaaatgccatgaaacaatctcgttttatt
gagcaaatcatggtaattggtgatggagaaaaaatgcctgctgcttttattcagcctaat
tttgaatttgtaaaagaatgggcaaaactgcataaagtaactttaggaagtacagatgcc
tctatcagcgaaaatgccgatgtaatcaaacgtattgatgaagaagtagaaaaaattaat
gagaaatttggtcactgggaaaaaatcaaacgttttgagcttactccagatgtctggtct
atcgatggcggacaactgactccaactctaaaactaaaacgtaaaatcatcaaagaaatt
tataaagatctttacgctaaaatatatggtcaaaattaa
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