KEGG   Flavobacterium sp. SLB02: GIY83_03655
Entry
GIY83_03655       CDS       T10548                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
flz  Flavobacterium sp. SLB02
Brite
KEGG Orthology (KO) [BR:flz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:flz02048]
    GIY83_03655
Enzymes [BR:flz01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GIY83_03655
Prokaryotic defense system [BR:flz02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GIY83_03655
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like T1RH-like_C DEAD AAA_22
Other DBs
NCBI-ProteinID: QGK73189
LinkDB
Position
complement(839749..843087)
AA seq 1112 aa
MAEYKNVEKPFLEKLKQLNWEVIDQGGFGIPQDPSKSLRSSFREVTLKGRFKTAVSKINA
SNGAEWLTDKQLEELFQEVTELEKSNRSLLEVNKAVFEKLTGKTKTTLSENETTGEKNIA
IKLIDFENWENNTFTAINQFRVVTPGGPREGIIPDIVLFINGLPVIVIECKDVDVSDPIS
EAINQIERYSNTRDDDFGIKEGEEKLFHYNLFSIATHGEEARFGTITGGYEYYLNWKDIF
PENYKSIEIKTYSDEEKVRYQNNGLHKKPDVRQEVVIQGMLNKEILLDVLCHFTLFMEIK
QGVEVKVICRYQQYRAVGKILNRLRIGQSPQERSGVVWHTQGSGKSLTMVFFVRKLRSQK
DLRDYKVIMMVDRKDLEDQLSKTAKLTGEFKEKNVIGSRKELVPKLSDNSSDLNMVMVHK
FVQEELKHSKALMKAFVEEGVVPEFKPFEVVNKSDRIIILIDEAHRTQGGDMGDNLFTAF
PNATKIAFTGTPLLTDRHKQKTHERFGGKGEFIDTYKIRQSVDDRATLDIIYIGKTTSDK
IIDRDELDHAFEDVFKERTKEEKEEIQRRYGTMQAYLENMDRLRKIAIDLVDHYIDEILP
NGFKSMVVANSVLAAARYEYLIQQAIDKRLELEKNKLEIDEVLIKQIEFLKVGTIVTQQD
NNEEAFISAARKRAKEFNAVDNFKKDFDYTIDDNGNYLKPETGYAFLCVCDRLLTGFDAP
IAQVMYLDKSIREHDLLQAIARVNRTKGEKEYGILVDYYGVSNHLKDALKIWGAENEEDI
KELLNYLRDINKEIPVLEARYNRMIQLFEDKGIKDFKGFAEQTIRDKDAEFKLAEQCIEL
AEAIPFRAQFDTYLKSFFDSLDLLFNSEVAKQYYIPAKRFGYLLMRIRNRYKDPTLDLKW
AKPKVRKIIDKYLETLGINSKIPPVSLLSDEFQKEVQNSGSTKSKASEMEHAIRRHIKVN
IDKDPALYMRFIERINQIMERYKGNWEQIFDEFNKLKIEIEIGRQYDSEFGLNKQELPFY
DLIVMNVYGDEKPDEEDNTIIIELVGELVKKLQEAINKPNFWKEREAEIRKLQGEIDDMF
DFSGIDTLSATKERLSIEIMNLAKRRHIELTK
NT seq 3339 nt   +upstreamnt  +downstreamnt
atggcagaatataaaaacgtagaaaaaccatttctagaaaaactaaagcaacttaactgg
gaagtaattgaccagggtggttttggtattccccaagatccttctaaaagtttgcgaagc
tcttttagagaagtaacacttaaaggacgttttaagactgctgtaagtaaaataaatgct
tctaatggagccgaatggttaacagataagcaactagaagagttgtttcaggaagtaact
gaattagaaaaaagcaatcgctcattgttggaagtgaataaagctgtttttgaaaaacta
actggaaaaactaaaacaacattatcggaaaatgaaactactggtgagaaaaatatagcc
attaaactcatcgattttgaaaattgggagaacaatacatttaccgctataaatcagttc
agagttgttactcctggaggtccaagagaaggtataataccggatattgtactttttata
aatggtttacctgttatagtaattgaatgtaaagatgtagatgtaagtgatcctatttcg
gaagcaattaaccaaatagaaagatattcaaatactagagatgatgactttggaataaaa
gaaggtgaagagaaattatttcattacaacctattttccattgcaacccatggcgaagaa
gcccgctttggtactattacaggaggttatgaatactacttaaactggaaagatatattc
ccagagaattataaatcaatagaaattaaaacctatagtgatgaagaaaaagttcgttat
caaaacaatggtttacataaaaaaccagatgtaagacaagaagtagtgattcaagggatg
ctcaacaaagaaattctgcttgatgtattgtgtcattttactcttttcatggaaattaaa
caaggggtcgaggttaaagtgatttgtcgctaccagcaataccgagcggttggaaaaata
ttgaatcgtcttcgtataggacaaagcccgcaagaacgttcgggagtagtttggcatact
caaggttcaggaaaatcattaacgatggtattctttgttcggaaattgcgttcccaaaaa
gatttaagagactataaagtaataatgatggtcgaccgtaaagacttagaagaccaactg
tcaaaaactgcaaaactgacaggtgaattcaaagaaaaaaatgtgataggttcacgtaaa
gaattagtcccaaaattaagtgataatagttctgatttgaacatggtgatggtacataag
tttgtacaggaagaattaaaacactccaaagccttaatgaaagcttttgtagaagaaggt
gtagtgccggaattcaaaccgtttgaggtggtaaataagtcagatcgtatcataatccta
atcgatgaagcgcacagaacacaaggtggtgatatgggagataatctatttactgctttt
cctaatgctaccaaaattgcatttacgggaacaccactcttaacggaccgtcacaagcaa
aaaacacacgaacgctttggcggaaaaggtgaatttatagacacctataaaattcgtcaa
tcggttgatgaccgagctacgttagatattatatacattggtaaaactacttctgacaaa
ataattgaccgtgatgaactagaccatgcctttgaagacgtctttaaagaacgaaccaag
gaagaaaaagaagaaattcaaagacgttacggaactatgcaagcctatcttgaaaacatg
gatagattgcgaaaaatagctattgatttggttgatcattatattgatgaaattctacca
aatggttttaaatctatggttgttgcaaattctgttttagctgcggcacgatatgaatat
ctaattcaacaagccatagataaaagattagaacttgaaaaaaacaagttagagattgat
gaggtgttaataaagcaaattgaatttcttaaggtaggaacaatagtaacccaacaagat
aataacgaagaagcttttattagtgctgctagaaaaagagctaaagaatttaatgccgta
gataatttcaaaaaagattttgattacactatagatgataacggtaattatttgaaacca
gaaaccggttatgcttttttatgtgtatgcgatcgattattaaccggttttgatgctcct
attgcacaagtaatgtacttagacaagagtattcgtgaacacgatttattacaagccatt
gcacgtgtaaacagaaccaaaggagaaaaggaatacgggatactggtagattattatggt
gtatcaaatcacttaaaagatgccttaaaaatttggggagctgaaaatgaggaggatatc
aaagaattgttaaactatttaagagatattaataaagagattccagttttggaagcaagg
tacaatcgaatgattcagctgtttgaagataaaggaataaaagacttcaaaggatttgca
gaacaaacaattagagataaggatgctgaattcaaacttgcggagcaatgtatcgaatta
gcagaagctattcctttcagagcgcagtttgatacctatttaaaatcgttttttgacagc
ttagatttgctatttaatagtgaagtggcaaaacaatactatattcctgctaaacgtttt
gggtatttattaatgagaatccgaaatcgttacaaagacccaacactggatttgaaatgg
gcaaaaccaaaagttagaaaaatcattgataaatatttggaaacattgggcattaatagt
aaaatacctcctgtaagtttgctgtctgacgaatttcagaaagaagttcaaaattctgga
agtacaaaatcaaaagcttctgaaatggaacatgccataagacgacacataaaagtcaat
atagataaagatccagctttatatatgcgttttattgagagaataaatcaaattatggaa
cgttataaaggaaattgggaacaaattttcgatgaatttaacaaactcaaaatagaaatt
gaaataggtagacaatacgattcagaatttggtttaaacaaacaagagctaccattctat
gatttgatcgttatgaatgtctatggagatgaaaagccagatgaagaagataatacaatt
ataatcgagctagtaggagaattagttaaaaaacttcaagaggcaattaacaaacctaac
ttctggaaagaaagggaggctgaaataagaaaacttcaaggtgaaatcgatgatatgttc
gacttttcaggaattgacaccttatcggcaacaaaagaaagattaagcatagaaataatg
aatcttgccaagagaaggcatattgaactgacaaaataa

DBGET integrated database retrieval system