Flavobacterium sp. SLB02: GIY83_08565
Help
Entry
GIY83_08565 CDS
T10548
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
flz Flavobacterium sp. SLB02
Pathway
flz03420
Nucleotide excision repair
flz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
flz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GIY83_08565
03430 Mismatch repair
GIY83_08565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
flz03400
]
GIY83_08565
Enzymes [BR:
flz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GIY83_08565
DNA repair and recombination proteins [BR:
flz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GIY83_08565
MMR (mismatch excision repair)
Other MMR factors
GIY83_08565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QGK77225
LinkDB
All DBs
Position
complement(2198062..2200398)
Genome browser
AA seq
778 aa
AA seq
DB search
MQKYIDQLNEAQRQPVLKKDGPMIIIAGAGSGKTRVLTIRIAYLMAQGIDAFNILSLTFT
NKAAREMKHRISDIVGASEAKNLWMGTFHSIFARILRAESDHLGYPSNFTIYDSQDSARL
ISSIIKEMQLDRDVYKPKQILGRISNYKNSLITVKAYFNNPELVEADAMAKRPRLGEIYQ
QYVERCFKAGAMDFDDLLLKTNELLTRFPEVLAKYQNRFRYILVDEYQDTNHSQYLIVRA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYEGVIMFRLEQNYRSTRNIVEAANT
VMEHNKTKLDKVVWTANDFGSKIKIHRSLTDAEEGRFVASTIFEQKMQNQLHNGAFAILY
RTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLCYLRLVINPKDEEALVRVINYP
ARGIGDTTVEKLTIAANHYKRSIWEVMVNIDKIDLKLNTGTKNKINDFVTMIQSFQVIDQ
NQDAFYITDYVTKKTGLVQELKKDATPEGMAKIQNIEELLNGLKDFTEGQKEIDGARGAL
SEFMEDVALATDLDKDTSDEDRVALMTIHLAKGLEFPHVFVVGMEEDLFPSAMSMSTRSE
LEEERRLFYVALTRAEHHAYLTYAQSRYRWGKLTDSEPSRFIEEIDAQYLEYLTPAETNY
RYKSPIDGDIFGDVDKSKLRLAKPIGSTPPKHVTNNQPKPDLNIRKLKPMTGTNPNSAAP
NLFDNKLTIGNVVMHERFGKGEVVNLEGVGADKKAEIKFEVGGIKKLLLRFAKLDVVG
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagtacattgaccagctcaatgaggcacaacgacaacccgttctaaaaaaagac
gggccaatgattattattgctggagcgggttctggaaaaacccgtgttttaactattaga
attgcttatttgatggcgcagggtattgacgctttcaatattttgtcgcttacgtttacg
aacaaagctgctcgtgaaatgaagcacaggatttcggatattgtgggagcatctgaagca
aaaaatctttggatgggaacttttcactcgatctttgcccgtattcttcgtgcggagtcg
gatcatttaggttatccatcgaattttaccatttatgattctcaggattcagcgagatta
atttcttcgattatcaaagaaatgcagctggatcgtgatgtttataaaccaaaacaaata
ttaggacgtatatctaattataaaaatagtttgattacggtaaaagcctatttcaataat
cctgaactggtagaggctgatgcaatggccaaaagacctcgtttgggagaaatttatcag
caatacgtagagcgttgttttaaagcaggagcgatggattttgatgatttgttgttgaaa
accaatgagttattgacccgttttccggaggttttagccaaatatcagaatcgttttcgt
tacatattggtggatgagtaccaggatacgaatcattctcagtatttgattgttagggct
ttatcagataagtttcagaatatttgtgtggttggtgatgatgcgcagagtatttatgct
ttccgtggggcgaatattaataatattttgaatttccagaaagattatgaaggcgtaata
atgtttcgtttagagcaaaattaccgttcgacaagaaatattgttgaagcggcgaatact
gtaatggaacataataaaacgaaactggataaggtagtttggactgcgaatgattttggc
tcaaaaattaaaatacatcgtagtttaacagatgctgaagaaggacgttttgtagcaagt
accatttttgaacaaaaaatgcaaaatcaattgcataatggtgcatttgcgattttgtat
cgtacgaatgctcagtcgcgtgcaatggaggatgctttgcgtaagagagatattccgtat
cgtatttatggtggattgtcgttctaccaacgtaaggagattaaagatgttttgtgttat
ttgcgtttggtaattaacccaaaagatgaagaagcgctggttcgtgtaattaattatccg
gctcgtggaattggtgatacaacggttgagaagttgactatcgccgcgaatcattataag
cgttcgatttgggaagtgatggtgaatattgataaaatcgacttgaaactgaacacagga
acaaagaacaaaatcaatgattttgtgacaatgatacagagttttcaggttattgatcaa
aatcaggatgctttttatattactgattatgtgactaagaaaaccggtcttgttcaggaa
ttaaagaaagatgctactcctgaaggaatggcaaagattcagaatatcgaagaactttta
aacggtttaaaagattttacagaaggacaaaaagaaattgatggcgcaagaggagctttg
tctgaatttatggaagatgtagcgcttgcaactgatttagataaagacacatctgatgaa
gatcgtgtggcattaatgacgattcacttagcaaaaggattggaatttcctcatgttttt
gtggtaggaatggaggaagatttgtttccgagtgcgatgagtatgagcacaagaagcgaa
ctagaagaagaacgtcgattattttacgtagctttaactcgtgcagagcatcatgcttat
ttaacatatgcacaatcgcgttaccgttgggggaaactgacagatagcgaaccatcgcgt
tttattgaagaaatcgacgcacaatacttggaatatttaactccggcagaaacgaattac
cgatataaatcacctatcgatggggatatttttggagatgtcgacaaatctaaattaaga
ctggcaaaaccaattggatctacgccaccaaaacatgttacgaataatcagccaaagcct
gatttgaatattcgtaaattaaagcccatgacaggaacgaatcctaatagtgctgcgccg
aatttatttgataataagctaactattggaaatgttgtaatgcacgaacgtttcggtaaa
ggtgaagtcgtgaatttagaaggtgttggtgctgataaaaaagcagaaataaaatttgaa
gttggaggtatcaagaaattgttgctaagatttgctaaattagatgtggtagggtag
DBGET
integrated database retrieval system
