KEGG   Flavobacterium sp. SLB02: GIY83_10890
Entry
GIY83_10890       CDS       T10548                                 
Name
(GenBank) DNA topoisomerase IB
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
flz  Flavobacterium sp. SLB02
Brite
KEGG Orthology (KO) [BR:flz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:flz03032]
    GIY83_10890
   03400 DNA repair and recombination proteins [BR:flz03400]
    GIY83_10890
Enzymes [BR:flz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     GIY83_10890
DNA replication proteins [BR:flz03032]
 Prokaryotic type
  DNA Topoisomerases
   GIY83_10890
DNA repair and recombination proteins [BR:flz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      GIY83_10890
SSDB
Motif
Pfam: Topoisom_I Top1B_N_bact TIL_2
Other DBs
NCBI-ProteinID: QGK77253
LinkDB
Position
complement(2864286..2865371)
AA seq 361 aa
MNAAAKTEKLMNQLIKTPHLVIEKLDLVYINNQRLPIERCEGEDGFIYKKNGRCIKQKSE
LKRFSSLVLPPAWVNVQISDLPNGHLQAVGLDVKNRKQYRYHPKWNLIRNQTKFYKIAEF
GSKLPLIRKQVDEDLEKKEWSKEKVVALVIRLMEETHIRIGNEKYAKDNKSYGLSTLRKR
HININKNSLRFEFTGKKGVQHTITTRNKKLIKLVSRCEEIPGWEVFKYYDKNGERKVLDS
HMVNEYLHEISGEYFSAKDFRTWAASIVFFETLMEIGTTSEEKEIKKNILTAFDTTAQAL
GNTRNVCKNYYVHPLLVSTYEDGSIEQYFESAKKCRSNREHFSHSEIAFSELIQNYQINL
L
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaatgcagctgcaaaaaccgaaaaactaatgaatcaattgatcaaaacaccgcatttg
gtgatcgaaaaattagatttagtttacatcaataatcaaaggctgcccatagagcgatgc
gaaggagaggatggttttatttataaaaaaaatggtcgttgcattaagcaaaaaagcgaa
ttgaaacgttttagcagtctggtgcttccgccggcatgggtaaacgttcagatttcggat
ttgccaaacggacatttgcaagcggtgggtctggatgttaaaaaccgaaaacaataccgc
tatcacccaaaatggaatttgattcgcaaccaaaccaagttttataaaatagccgaattt
ggaagcaaattgcctttgattcgaaaacaagtcgatgaggatctggaaaagaaagaatgg
tcgaaagaaaaagtggtcgccctggtgatcaggttaatggaagaaacgcatattagaatt
ggaaatgaaaaatacgccaaagacaataaatcgtacggactttcgactttaagaaaacgc
cacatcaacatcaataaaaattcgcttcggtttgaatttacaggaaaaaaaggggtacag
catacgattacaacccgtaataaaaaattgataaaactggtaagtcgctgtgaggaaatt
ccgggttgggaagtttttaagtattatgataaaaacggcgaaagaaaggttttggacagt
catatggtcaatgaatatttgcatgaaatttcaggagaatattttagtgccaaagatttt
agaacctgggccgcatcaatcgtgttttttgaaaccttaatggaaattggaacgacaagc
gaggaaaaagaaatcaaaaagaatatcctgaccgcttttgacacaacggcccaagctttg
ggaaatacgagaaatgtatgcaagaattattatgttcaccctttgctggtttcgacttac
gaagacggttcgattgaacaatattttgaaagtgccaaaaaatgtcgaagcaacagagag
cacttttcgcatagcgaaattgctttttcagaattaatacaaaactatcagattaattta
ttgtaa

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