Flavobacterium sp. SLB02: GIY83_14805
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Entry
GIY83_14805 CDS
T10548
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
flz Flavobacterium sp. SLB02
Pathway
flz03030
DNA replication
flz03430
Mismatch repair
flz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
flz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GIY83_14805 (dnaE)
03430 Mismatch repair
GIY83_14805 (dnaE)
03440 Homologous recombination
GIY83_14805 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
flz03032
]
GIY83_14805 (dnaE)
03400 DNA repair and recombination proteins [BR:
flz03400
]
GIY83_14805 (dnaE)
Enzymes [BR:
flz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GIY83_14805 (dnaE)
DNA replication proteins [BR:
flz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GIY83_14805 (dnaE)
DNA repair and recombination proteins [BR:
flz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GIY83_14805 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
QGK75299
LinkDB
All DBs
Position
4044067..4047129
Genome browser
AA seq
1020 aa
AA seq
DB search
MYLNSHSYHSLRYGTIPLDELIGQAVSCGVKAMALTDINTVTGIYDFIRKCDQKGIKALV
GMEFRSDHQFRYIGLAKNAHGLGQMNRFLTEHNFSGEPLPLIAPEFDSVFVIYTLENAPA
VLRENEFIGIRPDEVLRLLTSEHKNKTAKMLVLQSVTVSNKREFNLHKILRAIDTNIILS
KLTESDYCKASEKMLPLEDLLPYYENYPEIIANTEQIIDCCNFEYDFKTPKNKKFFTENR
QTDIAKLTQLAQEGLQWRYGENNQAAQKRVEKELKVIDQLEFSGYFLITWDIVQYSNSQG
FMHIGRGSGANSIIAYCLGITDICPIELDLYFERFLNLNRKSPPDFDIDWSWKERNTILE
YIFGKYGKDHVAFCGTNVEFKHRSIFREVGKVFGLPKEELDMLAKNPMALHQSNSIVKLV
QQYSLMMNKYPNQRSMHACGIIISEEPITNYTPLEMPPKGFPIVLFDMHIAEEIGFEKFD
ILSQRGIGHIDDSVKLIEKNRGIKVDIRNTSISKDEAICNVHLAQGKTIGCFYIESPAMR
GLLRRLNCDNYKILVAASSIIRPGVAQSGMMKEYIFRHNNPDEFEYFHQVFKEHLGETYG
IMVYQEDVIKIAQHYGGLPAPDGDILRRAMSGKGRSVEALQKVKDNFFASCAQKGHPEGL
SQEIYRQIESFAGFSFCKAHSASYAVESYQSLYLKINYPVEFMTAVINNQGGFYRTEVYI
HEARMSGARIHNPCVNKSEYQTTVYGTDIYLGFMHLQSLEAKTAHLIESDREKNGDFLSL
EDFINRIPIGIESMKILIFIDAFRFTGKTKNQLLVIASLLLNNFKPENRSLMLLQEPVKE
YKLPTLERSLYEDAFDEIELLSFPVSCSVFDLLQTKHRGDIMAKDLVAHHKKQVRMLAYL
ISRKQVPTKKGNMYFGTWIDHEGTYFDTAHFPDCLAQYPFEGGGCYLLLGTVEVDYHFPT
ITITKMAKMPFIADPRYMDAKDQYKTQRLIKEDVSPTHREPYPQGHEINLPRHRMKFQNT
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtatctcaactctcattcctatcattcgctacgctacggcacaattcctcttgatgag
cttatcgggcaggctgtctcatgtggtgtaaaagcaatggcacttaccgatattaatacg
gtaactggaatttatgattttataagaaagtgtgaccagaaaggtatcaaggctcttgtg
ggaatggaatttcgctctgatcatcaattcagatatattggtctggctaaaaatgctcat
ggacttggccaaatgaatcgttttttgacagaacataattttagcggagaacccctaccg
ttaattgcccctgaatttgattcggtttttgtaatttataccctagagaatgctccggca
gtcttgcgggagaatgaatttatcggaattcgccccgatgaagttttaaggcttcttacc
tcggaacataaaaataaaacagcaaaaatgcttgtgcttcaatcggtgactgttagcaat
aaaagagaatttaacctgcataaaattctacgggccattgataccaatatcattttatca
aagttaacagagtctgattattgcaaggcttcggagaaaatgttgcctttagaagatctt
ttaccctattatgaaaactatcctgaaattatagccaacacagagcaaataattgattgc
tgcaattttgaatatgattttaaaacgccaaaaaacaagaagttttttactgaaaaccgt
caaactgatattgcaaaactaacccaattagctcaagaaggtttacagtggcgttatggt
gagaataatcaggcggcgcaaaaacgtgtagagaaagaactaaaagtaattgatcaatta
gaattcagcggttattttctgatcacctgggatattgttcaatatagcaacagtcagggt
tttatgcatattggccgagggagcggagccaatagtattattgcctattgtttgggaatt
accgatatatgtcccatagaactggatttgtattttgagcgttttttgaatttaaaccga
aaaagtcctccggattttgacatcgactggagttggaaagagcgcaacaccattttagaa
tatatcttcggtaaatatggaaaagaccatgttgctttttgcggtaccaatgtcgaattc
aaacaccgctctattttcagggaagtgggaaaagtctttggccttcccaaagaggaactc
gatatgctggccaaaaatcccatggcattacaccaaagcaattctattgtaaaactggtt
cagcaatatagcctgatgatgaataaatatcccaatcagcgaagtatgcatgcttgcggg
attattatctctgaagagcccattaccaattatacacctctggaaatgcctccaaaagga
tttcctatcgtactttttgatatgcatattgccgaggaaattggttttgaaaaattcgat
attctaagtcagcgcggtattgggcatattgatgatagcgtgaaactcattgagaaaaac
aggggtatcaaagtcgacattcgcaatacttcgatctcaaaagatgaagcgatctgcaat
gttcatttggcacaaggcaaaaccattggttgtttttatattgaaagtcctgccatgcgc
ggattattgcgccgactcaattgtgataattataaaattctggtagctgcttcttctatt
attcgtcccggcgtggcacaatcgggtatgatgaaggagtatatttttcgtcataataat
cccgatgagtttgagtattttcatcaggtcttcaaagagcatctgggcgagacttacggc
attatggtctatcaggaggatgtgatcaaaattgcccagcattatggcggactccctgcc
cctgatggtgatatcctgcgccgggccatgtccggaaaagggagatctgtcgaggcttta
caaaaagtaaaagataatttctttgcctcttgcgcccagaaagggcatcctgaaggactt
agtcaggaaatttaccgccagattgaatcctttgccggattttcgttttgtaaagcgcac
tcggcttcttatgctgtagaaagctaccaaagtttatatctcaagatcaattatcctgta
gaatttatgacagcggtaatcaacaatcagggcggattttacagaaccgaggtttatata
cacgaggcgagaatgtccggggcaagaattcataatccgtgcgtgaataaaagcgaatac
cagactacggtttacggaactgatatttatctgggctttatgcatctgcaaagcctggaa
gcaaaaacggctcatttgattgaatcggatcgggagaaaaacggcgattttctttctttg
gaagatttcatcaatcgcattccaattggaattgaaagcatgaaaattttgattttcata
gatgcttttcgttttacgggaaaaaccaaaaatcagcttttggttatcgccagcttgctt
ttaaataatttcaaacccgaaaacagaagtttgatgctcctgcaggaacccgttaaagaa
tacaaacttccaacactggaacgctctttatacgaagatgcttttgatgaaattgaatta
ctgagtttccctgtatcgtgcagcgtttttgatcttttgcaaaccaaacatcgcggcgat
attatggccaaggatttagtggctcatcataaaaaacaagtccgcatgctggcgtatctg
atttccagaaaacaggtgcctaccaaaaaaggcaatatgtattttgggacctggattgat
catgagggtacttattttgacacggcacattttccggattgcctggctcaatatcctttt
gaaggcggaggttgttacctgcttttaggaactgtcgaggtcgattatcatttcccgaca
atcaccattaccaaaatggccaaaatgccttttattgccgacccgcgttatatggatgcc
aaagatcaatataaaacccagcgtttgatcaaggaggatgttagccctacgcatcgggaa
ccttatccgcaaggacatgagattaatttgccccgacaccgaatgaaatttcaaaacaca
taa
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