Flavobacterium sp. SLB02: GIY83_15655
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Entry
GIY83_15655 CDS
T10548
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
flz Flavobacterium sp. SLB02
Pathway
flz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
flz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GIY83_15655 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
flz03019
]
GIY83_15655 (groL)
03110 Chaperones and folding catalysts [BR:
flz03110
]
GIY83_15655 (groL)
03029 Mitochondrial biogenesis [BR:
flz03029
]
GIY83_15655 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
flz04147
]
GIY83_15655 (groL)
Enzymes [BR:
flz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GIY83_15655 (groL)
Messenger RNA biogenesis [BR:
flz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GIY83_15655 (groL)
Chaperones and folding catalysts [BR:
flz03110
]
Heat shock proteins
HSP60 / Chaperonin
GIY83_15655 (groL)
Mitochondrial biogenesis [BR:
flz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GIY83_15655 (groL)
Exosome [BR:
flz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GIY83_15655 (groL)
Exosomal proteins of other body fluids (saliva and urine)
GIY83_15655 (groL)
Exosomal proteins of breast cancer cells
GIY83_15655 (groL)
Exosomal proteins of colorectal cancer cells
GIY83_15655 (groL)
Exosomal proteins of bladder cancer cells
GIY83_15655 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
QGK75456
LinkDB
All DBs
Position
4251760..4253388
Genome browser
AA seq
542 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGGPTVTKDGVSVAKEIE
LKDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVADLAKQAKVVGSDSDKIKQIASISANNDEVIGELIATAFAKVGKEGVITVEEA
KGTDTFVDVVEGMQFDRGYLSPYFVTNPEKMEVELDSPYILLYDKKVSSLKELLPVLEPV
AQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGYTLENTTIEMLGTAKRVSIDKDNTTIVSGAGEADIIKNRVNQIKGQMETTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKAALADLKADNADEATGIQIVSRAVESPLRTIVENAGLEGSVVVAKVSEGSGDFGYNA
KTDEYVDMLTAGIIDPKKVTRVALENAASVAGMILTTECALIDIKEENAGGMPMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatattgaagcacgtgacggattaaaacgtggtgttgat
gcattagcaaatgctgtaaaagtaactcttggaccaaaaggtcgtaatgtaattattggt
aaatcatttggtggaccaactgttactaaagatggtgtttctgttgcaaaagaaatcgaa
ttaaaagacccattagaaaatatgggcgcgcaaatggttaaggaagttgcttctaaaacc
aatgatttagcgggagacggaactacaactgctacagttttagctcaggctatcgtaaaa
gaaggtcttaaaaacgttgctgcaggtgcaaacccaatggacttgaaacgtggtatcgat
aaagctgttgaagctattgttgctgaccttgcaaaacaagctaaagtagttggaagtgat
tctgataaaatcaaacaaattgcttctatctctgcaaataatgacgaagtaattggtgaa
ttaatcgctactgcttttgcaaaagtaggtaaagaaggtgttattactgttgaagaagct
aaaggaactgatacttttgttgacgttgttgaaggtatgcagtttgacagaggatatctt
tctccttacttcgtaacaaaccctgagaaaatggaagttgaattagactctccatacatc
ttattatacgacaaaaaagtatcttctttaaaagaattacttccagttttagagccggtt
gctcaatcaggaaaaccattattaattattgctgaagatgttgacggagaagctctttct
actcttgtagtaaataaattaagaggtgctcttaaaattgctgctgtaaaagctccaggt
tttggagacagaagaaaagcaatgcttgaagatatcgctatcttaactggtggaactgta
atttctgaagaaagaggctatacacttgaaaatacaactatcgaaatgttaggaactgca
aaaagagtttctatcgataaagacaacactacaattgtaagtggtgctggtgaagctgat
atcatcaaaaacagagttaaccaaattaaaggtcagatggagactactacatctgattat
gataaagaaaaattgcaagagcgtttggctaaattagctggtggtgttgctgttctttat
gttggtgctgcttctgaagttgaaatgaaagagaaaaaagacagagttgacgatgcatta
cacgctactcgcgctgctgttgaagaaggaattgttgctggtggtggtgttgctttatta
agagcaaaagctgcattagctgatcttaaagccgacaacgctgacgaagctacaggaatt
cagattgtatctcgcgctgttgaatctccattaagaactattgttgaaaatgcaggtctt
gaaggttctgtagtagtagcaaaagtttctgaaggttcaggtgattttggatacaatgca
aaaactgacgaatatgtagatatgcttacagctggaattatcgatcctaaaaaagtaact
cgtgtggcattagaaaatgctgcgtctgttgccggaatgatccttactacagaatgtgca
ttaattgatattaaagaagaaaacgcaggcggaatgccaatgggcggcggtatgccagga
atgatgtaa
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