Flavobacterium sp. SLB02: GIY83_16035
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Entry
GIY83_16035 CDS
T10548
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
flz Flavobacterium sp. SLB02
Brite
KEGG Orthology (KO) [BR:
flz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
flz01002
]
GIY83_16035
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flz01011
]
GIY83_16035
Peptidases and inhibitors [BR:
flz01002
]
Cysteine peptidases
Family C82
GIY83_16035
Peptidoglycan biosynthesis and degradation proteins [BR:
flz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GIY83_16035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QGK75526
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Position
4328370..4329956
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AA seq
528 aa
AA seq
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MNKLYFLLVICIFIGCKKETPKPIPAVVKKTAPAIILTDERKVEIDTALIGTFKSETLKQ
FYNSSDNKTVWGNLKKRTYVLSQLSKAGELGLEPEDYKASKLKKFEEKIASLNDADLATY
DILITYNFEKYLNHLYKGKLNPKKLYNDWDLEEKTFDVNNVLIKAFNKNKLDSVVDNIQS
KAYIYKQLLKSLEIINTFPDDDIKKIESVDKISLNDTNSALINIKKRLIYWQDMPKKDSL
TKIYDQKTFESIKKFQERHGLASDGVIGVGTISALNYSKERRKQQIIANLERWRWYNNDL
AENYFIINIPDYSLNVVEAQDTTLARNVVVGTSKRKTPIITSILKTVVFNPTWTVPPTIL
KEDVVPAMKRNRNYLANKNITIYDTAGNAVAPNNWNENKPGNYRYVQSPGYNNALGLMKI
LFPNHHSVYLHDTNHRNNFGRSNRSLSSGCVRVENPLELAEHILNDSEKWSKDRIDTIIA
SKKTTSIRITKKYALYQWYWTAWSKKNQLIFRADIYNLDSDLYAKLRN
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactttacttcttattagtaatatgcatttttattggctgtaaaaaagaaaca
ccaaaaccaattcctgctgtggtcaaaaaaaccgcaccggctatcatacttactgatgaa
agaaaagtagaaattgatactgcacttattggcacttttaaaagcgaaacgctgaaacaa
ttttacaattcatctgacaataaaactgtttggggaaacttaaaaaagagaacttacgtt
ttatctcaattatcaaaagccggggaactgggtctagagcctgaagattacaaagcttct
aagctaaagaaatttgaagaaaaaattgcttctttaaacgatgctgatcttgcaacatac
gacatacttattacttataacttcgaaaagtatttaaatcatctttacaaaggaaaatta
aacccaaaaaagttatataatgattgggatttagaagagaaaacttttgatgtaaacaat
gtccttatcaaagcttttaataagaacaaattagatagcgtggttgataatattcagtca
aaagcctatatctataaacaactattaaagtcgcttgaaatcattaatacttttccggat
gatgatatcaaaaaaattgaatctgtagacaaaatctccttaaacgacactaattcagcc
ttaataaacattaaaaaaaggcttatttactggcaagacatgcctaaaaaagatagtctg
actaaaatttatgatcaaaaaacatttgaatctataaagaaatttcaggaaagacacggc
ctggcatctgatggtgttattggtgtaggaactattagcgctttaaattattctaaagaa
agaaggaaacaacaaattatcgccaacttagaacgttggagatggtataataatgattta
gccgaaaactatttcatcataaacattccggattacagcctgaatgtagtcgaggctcaa
gatactactttggcgcgtaatgttgtggtaggaacgagcaaaagaaaaacacccattata
acttcgatattaaaaacggttgtcttcaaccctacatggacggttccgccaacgatatta
aaagaagatgttgttccggcaatgaaacgaaatcgtaattacctggccaataaaaacatt
actatatatgatactgccggaaatgcggttgcccctaacaactggaacgaaaacaaaccg
ggaaattatcgctatgtacaaagtcccggttacaacaatgctttggggttaatgaaaatt
ttatttccaaatcaccatagtgtgtatttacatgatactaatcaccgtaataattttgga
agaagcaatcgttcgttgagttcaggatgtgtgcgtgtggagaatcctctggaattggcc
gaacatattttaaacgattcagagaaatggtcaaaagacagaatcgataccattattgct
tcaaaaaaaacaacaagtatcagaattacaaaaaagtacgctttgtatcagtggtactgg
acggcatggagcaaaaaaaatcagctcattttcagagctgatatttataatctggattcg
gatttgtatgctaaattaagaaattag
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