Flavobacterium sp. SLB02: GIY83_17725
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Entry
GIY83_17725 CDS
T10548
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
flz Flavobacterium sp. SLB02
Pathway
flz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
flz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GIY83_17725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
flz03021
]
GIY83_17725
Transcription machinery [BR:
flz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GIY83_17725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
PgaD
DUF6285
GPW_gp25
Motif
Other DBs
NCBI-ProteinID:
QGK75847
LinkDB
All DBs
Position
4733867..4734730
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYALLEQSNERPPSAEEIAKELDMTVNDVKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPNPDRELIHESLRTEIERSLETLTPREADVVRLYFGL
GDQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaaaatcaccaagcaggtaaccaatcgtgaaactgcatcgttagacaaa
tacctacaagaaattggaaaagttgacctaattaccgctgatgaagaggtagaattagca
caaagaataaaggctggtgatcaaagagctttagaaaaattaacaaaagccaacctacgt
ttcgttgtatcggttgctaaacaatatcaaaatcaaggattaactcttccggatttaatt
aatgaaggaaacttaggtttaattaaagcggctcaacgttttgatgaaactcgtggtttc
aaattcatctcttatgctgtatggtggattcgtcaatcgatccttcaggctttggcagaa
caatcgcgtattgttcgtttaccattaaacaaaattggttctatcaataaaatcaacaaa
atgtatgcgttattagagcaatctaacgagcgtccgccttctgctgaagaaattgcaaaa
gaacttgacatgactgtaaatgacgtaaaagagtctatgaaaaactctggtcgtcactta
tctatggatgcacctcttgttgaaggtgaagattctaacctttatgacgttttacgttct
ggcgagtctccaaaccctgacagagagttaattcacgaatcattgcgtactgaaatcgag
cgttcattagaaacattaactccaagagaggcagatgttgttcgtttgtattttggtctt
ggcgatcaacacccaatgactttagaagaaattggagaaactttcgacttaactcgtgag
cgtgttcgccagattaaagaaaaagcaattcgtagattaaaacatacttcaagaagtaaa
attcttaaaacttatcttgggtaa
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