Flavobacterium sp. SLB02: GIY83_18340
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Entry
GIY83_18340 CDS
T10548
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
flz Flavobacterium sp. SLB02
Pathway
flz00300
Lysine biosynthesis
flz00470
D-Amino acid metabolism
flz00550
Peptidoglycan biosynthesis
flz01100
Metabolic pathways
flz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
flz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GIY83_18340
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GIY83_18340
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GIY83_18340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GIY83_18340
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
flz01011
]
GIY83_18340
Enzymes [BR:
flz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
GIY83_18340
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
GIY83_18340
Peptidoglycan biosynthesis and degradation proteins [BR:
flz01011
]
Precursor biosynthesis
Amino acid ligase
GIY83_18340
Racemase
GIY83_18340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QGK75954
LinkDB
All DBs
Position
complement(4905522..4907993)
Genome browser
AA seq
823 aa
AA seq
DB search
MSINLKSLIPILNAEWIGSETDIFINHISIDSRSLQNGSETLFIALSGVNNDAHLYIKEL
ITQGVQNFVVQYIPENCAGKANFLVVKNTLKALQEFAAYYRNLFDFPIIGLTGSNGKTIV
KEWLNFLLSPDFNIIRSPKSYNSQVGVPLSVIAINEKHNLGIFEAGISTVNEMVNLEKII
KPTIGVLTNIGSAHDEGFLNLVQKIDEKLILFKDCPVIIYQKSEIVDSCLSQFVAEYMMH
PRTLFSWSFTDISADVFILKKENKSDSTHIKYQYKEEVFSLEIPFSDTASVENAISCLVV
LLYLKYDSETIQNRFERLYPVHMRLEVKNGINNCSIIDDSYSSDFESLTIALDFLESQKK
KNASKTIILSDIVQSGFSNEELYTKVGQLVADNKINRVIGIGTTISAFKSEFSNVITFQN
TAEFIAQIENLNFENETILVKGARSFKFEEIVSLLEEKTHETVLEINLNSISYNLNYFKS
KLANNVKLMVMVKAFGYGNGGLEIAKLLEHHKVDYLGVAFADEGISLKNGGIKLPIMVLN
PESTSFPSIIQYNLEPEIYSVKGLKAFLKIAREKNLKDFPIHIKLDTGMHRLGFEENTLD
ELIQTLKGNSTVKVKSVLSHLATSDELQHYDFVISQINLFEKLSSRLISELDINPIRHIL
NTSGISNFPSAQYNMVRLGIGLYGVSNDPAEQKYLENVGTLKSIISQVRTIPAGDSVGYG
RRFMAEKETKIATIPIGYADGISRLWGNQVGYVVIKNQKASIVGNVCMDMLMVDVSHIDC
KEGDSVIIFGESPTVMEMGAALKTIPYEIMTSISQRVKRVFFR
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgagcataaacttaaaaagccttatcccgattcttaatgccgaatggattggctcagaa
actgatatatttattaatcatatttcaatcgatagccgttccttacaaaacggatctgaa
actttgtttattgccttatcaggtgttaataatgatgctcatttgtatattaaggagcta
attacacaaggtgttcaaaactttgtagtgcagtatattccagaaaattgtgctggaaaa
gctaattttctagtcgttaaaaataccctgaaagcgctacaggaatttgccgcatattat
cgtaatcttttcgattttcctattatcggattaaccggaagtaacggtaaaacgatagta
aaagaatggcttaattttctgctaagccctgattttaatattatcagaagcccaaaaagc
tacaattctcaagtaggagttccgttgtctgtaatagcgatcaatgaaaaacataattta
gggattttcgaagccggaatttctacggttaacgaaatggttaatctggagaaaattatc
aaacccacaattggcgtgcttacaaatataggaagtgcacacgacgagggttttttgaat
ttagtacaaaagattgacgaaaaattaattttatttaaagactgtccggtaataatctat
caaaagagcgaaattgtagattcttgtttgtcccagtttgtggccgaatatatgatgcac
ccaagaactcttttttcgtggagttttacagatatttctgcagatgtgtttattctgaaa
aaagaaaataaaagcgattcaacacatattaagtaccaatataaagaagaagttttcagc
ttagaaattccgtttagtgatacagcttctgtagaaaatgccatttcctgtttggtagtt
ttattgtatttaaaatacgattcagagacgattcaaaatagatttgagcgtttgtatcct
gtgcatatgcgtctggaagttaaaaacggaatcaataattgcagtataattgatgatagt
tacagctcagattttgagtcgcttactattgcccttgattttttagaaagccaaaagaaa
aagaatgcttcaaaaacgattatattatctgatattgttcagagcggattttctaacgaa
gaattgtatactaaagtagggcagttagtggcagataataaaattaatagagtaatagga
attggaactacaatttcggcttttaagtctgaattttctaatgtgattacttttcagaac
acagccgaatttattgctcagatcgaaaacctgaatttcgaaaatgaaactattttagta
aaaggtgctagatcatttaagttcgaagaaattgtgtcgctgctggaagagaaaacgcat
gaaacagttctcgaaataaatctgaattctataagttataacctgaattattttaaatca
aaattagccaataacgtaaagttaatggtaatggtaaaagcttttggttatggcaacgga
ggattggaaatcgccaaattgcttgaacatcataaagttgattatttaggtgtggctttc
gccgatgaaggaatctcacttaaaaatggcggaataaaactgcctattatggttttgaat
cctgaatcgaccagttttccttcgattattcagtacaatcttgagcctgaaatttatagt
gtaaaaggtttgaaagcctttttgaaaattgcccgcgaaaagaatttaaaagattttcct
attcatatcaaattagatacaggaatgcatcgtttgggttttgaagaaaatacactcgac
gaattaattcagaccttaaaaggaaattcgaccgtaaaagtaaaaagtgtgttgtctcat
ttggccacaagtgatgaattgcaacattatgattttgtgatttctcagattaatttattt
gaaaaactatcgtcgagattaatttcagaattagatataaatccaattcgccatattcta
aacacatccggaatcagcaatttcccgagcgcacaatacaatatggtacgtttaggaatt
ggtttgtacggtgtttcaaacgatcccgctgagcaaaaatatctggaaaatgttggaaca
ttaaaatcgattatctctcaggttcgtaccattcctgctggcgatagcgtaggttacggt
cgtcgttttatggccgaaaaagaaactaaaattgccacaataccaataggttatgctgac
gggatttctcgtttatggggaaaccaggttggttatgttgttattaaaaatcaaaaagca
tctattgtagggaatgtttgtatggatatgctaatggtcgatgtaagtcatatcgattgt
aaagaaggagattcggttattatttttggcgaaagtccaacagttatggaaatgggggcg
gcgctaaaaaccattccgtatgagatcatgacaagcatttcgcaacgcgtaaaaagagta
ttttttagatag
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