KEGG   Finegoldia magna: FMG_0631
Entry
FMG_0631          CDS       T00661                                 
Name
(GenBank) putative Zn-dependent hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
fma  Finegoldia magna
Pathway
fma03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fma00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FMG_0631
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fma03019]
    FMG_0631
Messenger RNA biogenesis [BR:fma03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     FMG_0631
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_6
Other DBs
NCBI-ProteinID: BAG08049
UniProt: B0S109
LinkDB
Position
696228..697895
AA seq 555 aa
MAKKNIDKLKVIPLGGLNEIGKNMTVVEYKDDIIVVDCGMTFPDEEMLGVDIVIPDISYL
EKNKEKIRGIVITHGHEDHIGAIPYVLKKLDAPVYGTKLTMGLLENKILEHKLSLKSLHT
VDYRKPIKLGAFSVEFVKVCHSIPDSASLAITTPVGVLFFTGDFKIDYTPIDNNRMDFGR
IASIGNKGVLALFADSTNVERQGYTLSEKSVGKTFINLFDDAPARIIVATFASNVHRIQQ
VISAAEHFNKKVALSGRSMINTVNVARELGYIKVGDKTIIDINDINKHKPNEIVLLTTGS
QGEPMSAMTRMANGTHRKVHLDPTDTVILSATPIPGNDNQVSSVINKLMEMGVKVIYSSL
ADVHVSGHACQEELKLMHSLVRPKFFVPLHGEMRHLKCHANLALDMGMKEKDIVIADNGN
TIEFTRKSINLVDTKFASNILVDGLGVGDVGNVVLRDRRHLSEDGLIVVVITLDARNKEV
IAGPDIISRGFVYVKENNDLMEECKSVVQNVLDECYTKNIYDWSTLKHNIRETLKKFLYQ
EIKRNPMILPVIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
atggcaaaaaagaatattgataaattaaaagttattccactaggaggacttaatgaaata
gggaaaaatatgacagtagtagaatacaaagatgatattattgtcgttgattgtggaatg
acatttcctgatgaagaaatgttgggggtagatatagtaatccctgatatttcttatcta
gaaaaaaataaggaaaagatcagaggaatagttataactcacggtcacgaagaccatatt
ggagcaattccttatgtattaaaaaaattagatgcccctgtttatggaacaaaacttaca
atgggactgttagaaaataaaatattggagcacaagttaagtttgaagtcacttcataca
gttgattacagaaaaccaattaaacttggtgcttttagcgtagagtttgtaaaagtatgt
cactcaattccagattctgcaagtttagctataacaactcctgtaggagttttgttcttt
actggtgattttaaaatagactacactccaattgataacaatagaatggattttggaaga
atagcttccataggtaataagggagttctagcactattcgctgatagtacaaatgttgaa
agacaaggttatactttaagtgaaaaaagtgttggtaaaacttttataaatttgtttgac
gatgcacctgctagaataattgtagcgacctttgcatctaatgttcacagaattcaacaa
gttatttcagctgctgagcatttcaataaaaaagtagctctttcaggaaggtctatgatt
aacactgttaacgttgcgcgtgagttaggatacattaaagttggcgacaaaactattatt
gatataaatgatatcaataagcataaaccaaacgaaatagttcttttaacaactggttct
caaggtgaaccaatgagtgcaatgacgagaatggctaatggtacacacagaaaagttcat
ttagatcctactgatacagttattttgtctgctacaccaattccaggaaatgataatcaa
gttagttcagttatcaataaattgatggaaatgggagttaaagttatttattcttccttg
gctgatgtacacgtaagtggacacgcttgtcaagaagaactgaaattgatgcattcatta
gttagacctaaattttttgttccacttcatggagaaatgagacacttaaagtgtcatgca
aatttagcacttgatatgggaatgaaagaaaaagatattgtgattgcagacaatggtaat
acaattgaatttacaagaaaaagcattaatcttgtcgacactaaatttgcaagtaacatt
ttagtagatggacttggagtaggtgatgttggaaatgttgtattaagagacagaagacat
ttatcagaagacggattaattgttgttgtaattactttggatgctagaaacaaagaagtt
atagctggtcctgacatcatttcaagaggatttgtatatgttaaagaaaataatgattta
atggaagagtgcaaatctgttgttcaaaatgttttagacgaatgttacacgaaaaatatc
tacgattggtcaactcttaaacacaatattagagaaacattaaagaaattcttgtaccaa
gaaatcaagagaaatccaatgatattgccagtaataatggaggtataa

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