Finegoldia magna: FMG_0705
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Entry
FMG_0705 CDS
T00661
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fma
Finegoldia magna
Brite
KEGG Orthology (KO) [BR:
fma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fma03032
]
FMG_0705
03400 DNA repair and recombination proteins [BR:
fma03400
]
FMG_0705
Enzymes [BR:
fma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FMG_0705
DNA replication proteins [BR:
fma03032
]
Prokaryotic type
DNA Topoisomerases
FMG_0705
DNA repair and recombination proteins [BR:
fma03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FMG_0705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_3
DUF7340
DmmA-like_C
DNA_ligase_ZBD
Zn_ribbon_RPB9
Zn_ribbon_PaaD
DUF7078
Zn_ribbon_recom
HypA
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
BAG08123
UniProt:
B0S183
LinkDB
All DBs
Position
768523..770589
Genome browser
AA seq
688 aa
AA seq
DB search
MANKKLVVVESPTKAKTIQKMLGSGYKVVATIGHLRDLPKSKLGIDIENDFEPRYINVRG
KANVINALKKDYKNSQKIFLATDPDREGEAISWHLCYLLGINPKEENRVKFQEITKDSVK
EAIKKPEAIDLKLVDAQQARRVLDRIVGYSISPLLWKKVKSGLSAGRVQSVALRLICERE
KEIREFEPEEYWSIHANLSKDKLDFDSELYYSKSDKSNKINIKNKDEADKILNDLSDKFV
VDSIKQQKKARKPYAPFTTSTLQQEAYKKLYFQTSKTMRIAQQLYEGISLGSEGSVGLIT
YMRTDSTRISQVCVNDCLDIINELYGKQYATRGYDYSKKKKGSQDAHEGIRPSSVKRRPN
EIKKYLTEDQYKLYKLIWERTVASQMKDARYLSTSIDFDNNGYTFRSNGNVVIFDGFTRV
YSLNTKDSELPELKDREAISSNEIEPKQHFTKPKPRYTEASLVKTLEEDGIGRPSTYASI
ISSILSRNYVELKEKKFYTTEIGEKVCEFVVKYFDSIINEKFTAEMENELDNIAENDVEW
KKVIRDFYNGFNEDLVNAKNAQDKFKVKDEPIGRKCPECGNDLVIKHGRNGKFIGCSAFP
ECKYTETIVKDTKVKCPKCGHRIIEKVSKRGKVFYGCENYPNCDFALWDKPTGEKCPECG
SLLVHRKNRRGESVLCSNEKCNYKKLEK
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaaaagctagtagtagtggaatctccaaccaaagcaaaaacaattcaaaaa
atgttaggctctggatataaagttgtagctactataggtcatttaagagatttaccgaaa
agcaaactggggatagatatagagaatgattttgaaccacgatatatcaatgttcgtggt
aaagctaatgttattaatgctttaaaaaaagattataagaattctcaaaaaatattcttg
gcaactgaccctgatagagaaggagaagccatttcttggcatttgtgctatttattagga
ataaatccgaaggaagaaaatagagtaaaatttcaagagataacaaaagactccgtaaaa
gaagcaatcaaaaagccggaagctattgatttaaaattggtagatgctcaacaagcaaga
agagttttggatcgtattgtaggttatagcatttctccattattatggaagaaagttaaa
tcaggactaagtgctggtagagtacagtctgtagcattaagactaatttgtgaaagagaa
aaagaaataagagagtttgagccagaagaatactggtcaattcatgcaaacttatcaaaa
gataaattagattttgattctgaactatattattcaaaaagcgataaatctaataaaata
aatataaaaaacaaagatgaagctgataaaattttaaatgatttatctgataaattcgtt
gtagactcaataaagcaacaaaaaaaagcaagaaaaccatacgctccatttacaacatcg
acacttcaacaagaggcatataaaaagttatattttcaaacgtcaaaaacgatgagaatt
gctcaacagctatatgaaggaattagtttgggaagcgaagggtcagtaggtttgattact
tatatgagaactgattcaacaaggatttctcaggtttgtgttaatgattgtttagatatt
attaatgagctttatggaaaacaatatgcaacaagaggatatgattattccaaaaagaaa
aaaggatcacaagatgcacacgaaggaattagaccatcgtctgtaaaaagaagaccgaat
gaaattaaaaaatatttgaccgaagatcaatacaaactatataagttgatttgggaaaga
actgttgctagtcagatgaaagatgcaagatatttatctacatcaattgattttgataat
aatggatacacctttagatctaatggcaatgttgttatttttgatggatttacaagagtt
tattcattaaacactaaagatagtgaattaccagaattaaaagatagagaagctatatct
tcaaatgaaatcgaacctaaacagcactttactaaaccaaaacctagatatacagaagca
agtttggtaaaaacgctagaagaagatggtattggtagaccaagcacttatgcgtctatt
attagcagtattttgtccagaaattacgttgaacttaaagaaaaaaaattctatacaact
gaaattggtgaaaaagtttgtgaatttgtagttaaatactttgattcaattatcaatgaa
aaatttactgcagagatggagaatgaattagataatattgccgaaaacgacgttgaatgg
aaaaaagtaattagagatttttataatggatttaatgaagatttagttaatgcaaaaaat
gcacaagataaatttaaagttaaagatgaaccaattggaagaaaatgcccagaatgtggc
aatgatttggtaataaagcatggaagaaacggaaaatttatcggatgcagtgcatttcct
gagtgtaagtacacagaaacgatagtaaaagatacaaaggtaaaatgtccaaaatgtgga
catagaattattgaaaaagtgtctaaaagaggtaaggttttttatggatgcgaaaattat
ccaaattgtgactttgctttatgggataaacctactggagaaaaatgtcctgaatgtgga
agcttattagttcatagaaaaaatagacgtggtgaatccgtactttgctctaacgaaaaa
tgtaattataaaaagcttgaaaaataa
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