Finegoldia magna: FMG_1117
Help
Entry
FMG_1117 CDS
T00661
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
fma
Finegoldia magna
Pathway
fma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FMG_1117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fma03021
]
FMG_1117
03400 DNA repair and recombination proteins [BR:
fma03400
]
FMG_1117
Enzymes [BR:
fma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FMG_1117
Transcription machinery [BR:
fma03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FMG_1117
DNA repair and recombination proteins [BR:
fma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FMG_1117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
NusG_add
Motif
Other DBs
NCBI-ProteinID:
BAG08535
UniProt:
B0S2E5
LinkDB
All DBs
Position
complement(1215044..1218706)
Genome browser
AA seq
1220 aa
AA seq
DB search
MILMNSAAMIDYKKGEGSLVQKNTFEAMKIGLASPDKIRQWSWGEVKKPETINYRTLKPE
KEGLFCEKIFGPTKDYECNCGKYKRIRYKGIVCEKCGVEVTKSKVRRERMGHIELATPVS
HIWYFKGIPSRMGLLLDMSPRALEKVLYFASFVVIDPGKTDLYEKQLLTEQEYEEYCDKY
EEDVDFRAKMGAEAIKELLQKIDLQEEYKNLTETFEGSTGQKKVRILRRLEVVEAFIESK
NDPSWMIMDVIPVIPPDIRPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDIGSPEII
VRNEKRMLQEAVDALIDNGRRGKPVTGPGNRPLKSLSDMLKGKSGRFRQNLLGKRVDYSG
RSVIVIGPNLKFYQCGLPKKMALELFKPFVIRELVKREISHNVKNAKKLVERENDKVWDV
LEDIIVDHPVLLNRAPTLHRLGIQAFEPILVEGKAIKLHPLVCTAYNADFDGDQMAVHLP
LSPEAQAEARLLMLSTNNILAPKDGKPITTPSQDMVLGSFYMTTRKEGQKGEGLIFKDID
EMMLAYAMHYVTLQTIVKVRRNSVNNDGTSKIVESTVGRFIFNEGIPQDLGMVNRNEDPY
SLEVDLQVDKKMLSKIIDLTFRRYGNIRTAELLDYIKSMGYKYSTIGALTISMGDITIPD
SKKGIIEQAEQRIDMVQDIYLQGDITNEERYKKVIEIWEQCIKDVTRALMTNLPADNNLN
IMAVSGARGSENQIRQLGGMRGLMSDTAGNTIEIPITSNFREGLSVQEFFISTHGSRKGL
SDTALRTADSGYLTRRLVDVSQDVIITEDDCGTDEYIVAKEIKDGNRQVEDLKSRIIGRY
AFEDILDLDTGEIIVHKNDMINEAIAERIESKGIKEVKVRSVLGCKMKHGVCAKCYGRNL
ATGKPVNIGEAVGIIAAQSIGEPGTQLTMRTFHSGGIAGVGITSGLPRVEELFEARKPKG
LAYITEIEGTVKIQENKKRNDVIVTSEDGEEQVYQIPYGAHIRVNEGDHVEKGEPLTEGS
INPQDILRVNGAEGVRDYIIREVQKVYRLQGVDIDDKHIEIIIRQMMSKIKVEESGDSGF
LSGSVVDARDFKMTNEQLIKEGKTPATGTHSLMGITKASLATESFLSAASFQETTRVLTE
TSIKGKVDHLIGLKENVIIGKLIPAGTGIAKYDRIEVDYDGKAEDDMIEAEKAQASNDSE
EAEESTIISGNYESLQDEDK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgattctaatgaattcggcagcgatgatagactataagaaaggagagggctccttggta
caaaaaaatacttttgaagctatgaaaattggtttggcttcaccagacaaaattagacaa
tggtcttggggagaagttaaaaaaccagaaactataaattatagaacattaaaacctgaa
aaagaaggtttattctgtgaaaaaatatttggacctacaaaagattacgaatgtaattgt
ggtaagtacaaaagaataagatacaagggcattgtatgcgaaaaatgtggtgtagaagtt
acaaaatcaaaagttagacgtgaaagaatgggccacattgaacttgcaactcctgtaagt
catatttggtatttcaaaggaattccatcacgtatgggattgttattggatatgagtcct
agagcacttgaaaaagtactttattttgcatcatttgtagttatagatccaggtaagact
gatttatatgaaaaacaattattaactgaacaagaatacgaagaatattgtgacaagtac
gaagaagatgttgatttcagagccaaaatgggagctgaagcaataaaagaacttcttcaa
aagatagacttacaagaagaatacaaaaacttaactgaaacttttgaaggatcaactgga
caaaagaaagttagaattttaagaagacttgaagttgttgaagcatttatcgaatcaaaa
aatgatccatcatggatgattatggatgtaattccagtaattccaccagatatcagacca
atggtacaacttgaaggcggaagatttgctacaagtgatttgaatgatttatacagaaga
gttatcaacagaaacaatcgtctaaaaagattattggatattggatctcctgaaatcatt
gtaagaaacgaaaaaagaatgcttcaagaagcagtagatgctcttattgataatggtaga
cgtggaaaacctgtaacaggacctggcaacagaccattgaagagtttgtcagatatgtta
aaaggtaaatctggtcgtttcagacaaaacttgttaggtaagagagttgactattctggt
cgttcagtaatagttatcggaccaaatttgaaattctatcaatgcggtcttcctaagaaa
atggctcttgaattattcaaaccatttgtaattagagaattagttaagagagaaatttca
cacaacgttaaaaacgctaagaaattagtagaaagagaaaacgacaaagtgtgggatgtt
ttggaagatattatagtcgatcatccagtattattaaaccgtgcaccgacattgcacaga
cttggtattcaagcatttgaaccaatattagttgaaggaaaagctatcaaacttcaccca
ttggtatgtactgcatacaatgcggactttgacggtgaccaaatggcagtccatttgcca
ctttcaccagaagcacaagcagaagctagacttttgatgttaagtacaaataacatcctt
gcaccaaaagatggtaagccaattacaactccttcacaagatatggtattgggttcattc
tatatgactactagaaaagaaggtcaaaaaggcgaaggcttaatcttcaaagatattgat
gaaatgatgttggcttatgcaatgcattatgtaacattgcaaacaatagtaaaagttaga
cgtaacagtgtaaataacgatggaacaagtaaaattgtagaaagcactgtcggtagattt
attttcaacgaaggaatccctcaagatttgggaatggtaaatagaaatgaagatccatac
tcacttgaagttgatttacaagttgataagaaaatgctatctaaaattattgatttaact
ttcagaagatatggaaatatcagaactgctgaattgttagactacattaagtctatggga
tacaagtattccacaatcggtgcattgacaatatcaatgggagatattacaattcctgat
tctaagaagggaattattgaacaagcagaacaaagaattgatatggttcaagatatctat
cttcaaggggatattactaacgaagaaagatacaagaaagttatcgaaatttgggaacaa
tgtattaaagatgtaactagagcgttgatgacaaatcttcctgccgacaacaacttgaat
atcatggccgtttctggagcccgtggtagtgaaaaccaaatcagacaattaggtggtatg
cgtggtcttatgtccgatactgctggtaacacaatcgaaattcctatcacatcaaacttc
cgtgaaggtctttccgtacaagagttctttatttcaactcacggttcaagaaaaggtcta
tcagatacagctcttagaactgcggactctggatatttgacaagaagacttgtagatgta
tcacaagatgttatcataactgaagatgattgtggtactgatgagtatatagttgcaaaa
gaaatcaaagacggaaacagacaagttgaagatttaaaatctagaattatcggtagatat
gcatttgaagatattcttgatttggatactggagaaatcattgttcataaaaatgatatg
attaatgaagcaatcgctgaaagaatagaatcaaaaggtatcaaagaagttaaagtaaga
agtgttcttggatgtaagatgaaacacggtgtttgtgctaaatgttacggaagaaactta
gctactggtaagccagtaaacattggtgaagcagttggtattatcgctgcacaatcaatc
ggtgaaccgggtacgcaattgacaatgagaactttccactcaggtggtatcgccggagta
ggaatcacatcaggtcttcctagagttgaagagttatttgaagctcgtaaaccaaaagga
cttgcttacattactgaaatagaaggtactgtaaaaattcaagaaaacaagaagagaaat
gatgtaatcgtaactagtgaagacggagaagaacaagtttatcaaattccatacggcgct
cacatcagagttaacgagggagatcatgtagaaaaaggtgaaccattaacagaaggttca
atcaatccacaagatattctaagagttaacggagcagaaggcgttcgtgattatataatt
agagaagttcaaaaagtttacagactacaaggtgtagacattgatgataagcacatcgaa
attataatcagacaaatgatgagcaaaatcaaagttgaagaaagtggcgattcaggattc
ttatcaggcagcgtagtagatgcaagagatttcaagatgactaatgaacaacttatcaaa
gaaggaaaaactccggcaacaggaactcattccttgatgggtatcacaaaagcatcactt
gcaactgaaagtttcttgtctgcagcatcattccaagaaactacaagagtattaacagaa
acatctattaaaggaaaagtagatcacttaataggcttaaaagaaaatgtaataattggt
aaattaatacctgctggtacaggaatagcaaaatatgacagaattgaagtagattatgat
ggtaaagctgaagatgatatgattgaagctgaaaaagcacaagcgtcaaatgattctgaa
gaagctgaagaatctactataatatctggaaattacgaatcattacaagatgaagataaa
taa
DBGET
integrated database retrieval system
