Fomitiporia mediterranea: FOMMEDRAFT_100924
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Entry
FOMMEDRAFT_100924 CDS
T03132
Name
(RefSeq) hypothetical protein
KO
K09184
GATA-binding protein, other eukaryote
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fme03000
]
FOMMEDRAFT_100924
Transcription factors [BR:
fme03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
FOMMEDRAFT_100924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GATA
DUF7573
Zn_Ribbon_TF
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
18669778
NCBI-ProteinID:
XP_007261540
JGI:
Fomme1_100924
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MSPIILEPPTMSFHHNNNLNNLAKLQLNHSASPSADDVASRIESPKALSASSYRPVLHSP
APPSSGHSPSPRGRERRFDQDTITKTSSDLLPSSSQCASCNATKTSQWRRDADGRQICNA
CGLSQKTRRTPRRSSISRSSLSPAGTGSLPHHTPSNSDSSPGRQMSGSPQHSPVASPMNQ
SIVQQNNKQQPQVQALRGTCPGDGRCDGTGGTSACAGCPTYNNTLQARFELEMADSQAAS
PSVDLSGSSPGTHALAHGNAQHDTITKTAEAGTSGGRMPRGRSAVGALSCANCGTSTTPL
WRRDDAGNNICNACGLYYKLHGTHRPNSMKKTVIKRRKRVPAAGPGPTTMQMPSPGQGSG
RQLPRMSEQAAAETLVSVGRGAHDRSPIGESDDDNDRQHLRKKPRRGVAGELGPEYEEGE
RLREQRRREGWQEEGQPQGSSSGFGTFSVDNQAARSGAFYSPSLGQATGGYDLPPLNAAL
GGDKMGSRYAYAAQGAASSSYSRSEGIPTRTHSPASLHQPGSQQSAPLNTGFHLPPPHGL
GQGHPPFFHGSGASSGHLGQARTSSPRAPSPLREGTTGGDGSVVIVPTINELEAHYHELT
EQRRRMQEMLERTDRMIAGVKRGMDEMRGGSGAGNGNGNGVSTGASASAPLPLSSRGDRR
EGMNIWPVAPDPSARE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgataatcctcgaacctcccaccatgtctttccaccacaataacaacctcaac
aacctcgccaagctccaacttaaccattctgcctctccatccgcagatgatgtagccagt
cgcatcgagtcccccaaggccctcagtgccagctcgtaccgacccgtgctccattctcca
gcgccgccctcctcgggtcattcgccctctccgcgcggtcgcgaaaggcgttttgatcaa
gatactatcacaaagacaagcagcgatcttcttccctcatcttctcaatgtgccagctgt
aacgcgacaaagacgtcgcaatggcgccgtgacgctgatggcaggcaaatctgcaatgcg
tgcggtcttagccaaaagactcgccgtacccctaggcgttcatccatctcgcgctcatct
ctctctccagctggcactggatcgctgccccaccacactccctccaactccgattcctct
cctggtcgacagatgtcgggttctcctcagcactccccagtggcgtcacccatgaatcag
tcaatcgttcaacaaaataacaagcaacagcctcaagtgcaggctctcaggggtacgtgt
cccggcgacgggcgttgcgacggaacggggggtacgtcggcttgcgctggctgccctacg
tacaacaatacgctccaagctcgctttgagcttgaaatggctgactctcaggctgcttcg
ccttccgtagatctcagcggcagctcgccgggtacccacgcgcttgcgcacgggaacgcg
cagcacgatactattactaaaaccgccgaagctggtaccagcgggggcaggatgccccgt
ggccgcagtgcggtcggtgcactcagctgtgcaaattgtggaacgagcacaacgcccctc
tggcgacgcgacgatgcaggcaacaacatttgcaacgcgtgtggtctctattacaaactt
cacggcacccatcggccgaattcgatgaagaagacggtcattaagcgacggaaacgcgtg
ccagcagcaggccccggccccacaacaatgcagatgccttcacctggtcaaggttcaggt
cgccaactccctcgcatgtctgagcaggcagctgcagagacacttgtttctgtaggtcgt
ggagcacatgatcgtagccctatcggcgagagcgacgacgacaacgatcgtcagcacttg
aggaaaaaaccgaggcgcggagttgctggagagttaggaccggaatacgaggaaggcgaa
agactgcgggaacaacgcagacgtgaaggctggcaagaagaaggccagcctcaaggctcg
tcatcaggttttgggaccttctccgtagacaatcaagctgcgcgttctggtgcattctat
agcccttcgctaggccaagctacaggcggatatgacttgccaccactgaacgctgcgctc
ggcggggataaaatgggttctcgatatgcttatgcggcgcagggagctgcatcgtcgtcg
tattctcgttcagagggcattccgactcgcacgcattcccctgcttctctgcaccagccg
ggttcgcaacaatccgcacctcttaatactggcttccacttaccgccaccacacggcctt
gggcagggacatccaccctttttccatggatctggtgcaagtagtggacatctcggtcag
gcacgtacgagttcgcctcgtgcgccttctccgcttcgagagggaaccacaggaggagac
ggttcggtcgtgatagtgccaaccatcaacgaacttgaggcacattaccatgagctcaca
gagcaacgccgccgaatgcaggagatgctcgaaaggacggaccggatgatagcgggcgta
aagcgtggaatggacgaaatgcgtggtggaagtggggctggaaatggaaatggcaacggg
gttagcacaggcgcaagtgctagtgcgcctctccctctgtcttcacgcggagaccgaagg
gagggaatgaacatctggcctgtcgcccccgatccctccgcccgggaatga
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