Fomitiporia mediterranea: FOMMEDRAFT_101493
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Entry
FOMMEDRAFT_101493 CDS
T03132
Name
(RefSeq) initiator tRNA phosphoribosyl transferase
KO
K15463
tRNA A64-2'-O-ribosylphosphate transferase [EC:2.4.2.-]
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fme03016
]
FOMMEDRAFT_101493
Transfer RNA biogenesis [BR:
fme03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
FOMMEDRAFT_101493
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Rit1_C
Init_tRNA_PT
Motif
Other DBs
NCBI-GeneID:
18669825
NCBI-ProteinID:
XP_007262023
JGI:
Fomme1_101493
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MDRKKFEHAALTQIRKQSLDPYNRLHSIAEDIDCVQSVHEKYASYPLLANLRCGAWYADP
RNANGITTHFKSADGHYNAWSFNLRRPNLHILPLILDAHGICIVDSTRSGKRMPDSFAKA
VPIWCAVINRALALRKANDEDNGKDRDNWDVELYTPPQSVSKQEHSQIADKLDRWADELA
RSTYSLPNLHKPLRPIWITPATSTLPVFEQGTAFYPVICISASKCVEEGVERRRHGYSYV
QGAGDDHENWSLGLTPETFWRHKDELLFASELDFPDVLKKMVNLNERSNPSTLRLSTISE
GKGWTNPLTPIAHVKGLLSICKLSDIPQSALKLDVAALVSAGGTNADTSSEKEKLDESNS
STDFAYAYIVARSRPRPTTDETKSSPSTNENNNDLQKYTHIHEITLPTDKKGAERAFKAS
LSGCLAFIRHHLLSQVSQPQSQPESQQRNCEIKKKICVACETGTDLSVGVVLVALQAFFD
DSGSLDLTRWGEGRGDVVVNKETLRARLHWIIASRPESNPSRATLKRVNEFFMPSPFIAR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcaaaaagttcgaacacgcagcgctaactcaaatccgcaaacaatcactcgac
ccatacaaccggcttcactcgatcgcagaagatatcgactgcgtgcaaagtgtacatgag
aagtacgcttcgtatccgttacttgctaacttacgatgtggagcttggtacgccgatccc
cgcaatgcaaatggcataaccacgcacttcaaatccgctgacggacactataacgcttgg
agtttcaacctccgtcgtccaaacttacatatcttgcctttgatccttgatgcacacggg
atatgcatcgtagactcgacgcgatccggcaaacggatgccagactcgttcgccaaggcc
gtacctatctggtgtgctgtaattaacagagcactggcgctcagaaaagctaatgacgag
gacaacggaaaagacagggataattgggatgtagaattatatacccctccacaaagtgtg
agcaaacaagaacacagccaaatcgcggataagctagacagatgggctgatgaactcgcg
agatcaacctactcgctacccaatctccacaaaccactccgccctatctggatcactccc
gctacgagtactttaccagtctttgaacaagggacggcgttttatcctgttatatgtata
tctgcgtcgaaatgtgttgaggaaggcgtggagagacggagacacggctattcgtatgtt
cagggagctggggatgatcacgaaaattggagtttggggctcacaccagagactttctgg
agacacaaagacgagttactcttcgcctcagagcttgatttcccggatgttctgaagaag
atggtcaaccttaacgagaggtccaatccctctactttacgactttctactatctcagag
gggaaggggtggacgaaccctcttacgcctatcgcgcacgttaaaggtctcttatccatc
tgtaagctcagcgacataccacaatcggctttaaaattagacgttgcagcactagtgtca
gcagggggaaccaatgctgataccagttccgagaaagaaaaattagacgagtcaaatagt
tccaccgactttgcgtatgcgtatatcgtcgctcgttctcgtccacgtccgaccaccgac
gaaactaaatccagtccgtcaaccaatgagaacaacaacgatctgcagaagtacacacat
atccacgaaattacactaccgactgacaaaaagggtgcagaacgagcgttcaaagcgagt
ctatcaggttgcttagctttcatccggcatcatcttctctctcaagtctcccagccccag
tcccagcccgaatcccagcaacgcaattgtgaaatcaaaaagaaaatctgtgtcgcatgc
gagacagggaccgacctgagcgttggtgtcgtactcgttgctttacaggctttcttcgat
gattccgggagtttggacttgacaagatggggggagggaagaggggatgttgtggttaac
aaggagacgctccgcgcaagattacattggatcatagcgagtagaccagaatctaatccc
tcgagagcgacgctgaaacgcgtgaatgagttcttcatgccgtcaccttttattgcgcgt
tag
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