Fomitiporia mediterranea: FOMMEDRAFT_101900
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Entry
FOMMEDRAFT_101900 CDS
T03132
Name
(RefSeq) vesicle membrane protein with acyltransferase activity
KO
K08516
synaptobrevin homolog YKT6
Organism
fme
Fomitiporia mediterranea
Pathway
fme04130
SNARE interactions in vesicular transport
fme04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
FOMMEDRAFT_101900
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
FOMMEDRAFT_101900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_101900
Membrane trafficking [BR:
fme04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
FOMMEDRAFT_101900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
Longin
Pallilysin
Motif
Other DBs
NCBI-GeneID:
18669850
NCBI-ProteinID:
XP_007262441
JGI:
Fomme1_101900
LinkDB
All DBs
Position
Unknown
AA seq
204 aa
AA seq
DB search
MKIYAISILNTPQGGSAKMLSSASDLSSFSFYQRGTIAEFLAFFSGLVAERTSPGERQSF
TDVDKQDSEYVFHVYNRGGEQPIAGVMVSDKEYPRRAAFSVLTKTLETFSTKVLPSSYAN
PSSISFPDLKDYLQQYQDPRNADAIMRLQGELDETKLVMHQTIESVLKRGEKLDDLVVRS
EMLGAQSKRFYTTAKRQNRCCVIM
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaagatctatgccatctcaatactcaacaccccgcaaggaggctccgctaaaatgctt
tccagcgcatcagatctctcctccttctccttctaccaacgaggtacaatcgcagagttc
ctcgccttcttcagcgggctggttgcagagcgaacatcccctggcgagcgtcagagtttc
acagatgtcgacaagcaggacagcgagtatgtcttccacgtatataatcgcggtggtgag
caaccgatcgctggtgtaatggtgtcagataaagagtaccctagacgtgccgccttctca
gtccttaccaagaccctcgaaacattctccactaaagtcctcccgtcctcttacgccaac
ccatcctccatctccttccccgatctcaaggattacctccaacaatatcaagacccgcgc
aacgcagatgctataatgcgactccagggagaactcgacgaaacgaaactcgtcatgcac
cagactatcgaatctgttttgaaacgtggagagaagcttgatgaccttgtcgttaggtcg
gagatgcttggggcgcagagtaaaagattttacactactgctaagaggcaaaacaggtgc
tgcgttattatgtga
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