KEGG   Fomitiporia mediterranea: FOMMEDRAFT_103051
Entry
FOMMEDRAFT_103051 CDS       T03132                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K14298  mRNA export factor
Organism
fme  Fomitiporia mediterranea
Pathway
fme03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    FOMMEDRAFT_103051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fme03019]
    FOMMEDRAFT_103051
   03036 Chromosome and associated proteins [BR:fme03036]
    FOMMEDRAFT_103051
Messenger RNA biogenesis [BR:fme03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     FOMMEDRAFT_103051
Chromosome and associated proteins [BR:fme03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    FOMMEDRAFT_103051
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_CDC20-Fz WD40_Prp19 WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_RIG_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_WDR19_1st RMC1_N Beta-prop_NUP159_NUP214 Mala_s_1-like
Other DBs
NCBI-GeneID: 18669930
NCBI-ProteinID: XP_007263263
JGI: Fomme1_103051
LinkDB
Position
Unknown
AA seq 358 aa
MSFFPTTSGATSATLGGTAANEPKDVEVSDPPSDSISSLAFSTAGEYLAVGSWNNEVRIY
EVNPQGGQTQGKAMYTHQGPVLGVCWNKEGNKVISCGADNAARMYDLATGQSSQVAQHDA
PIKCVRWIESPQGGFLATGSWDKTLKYWDTRSSTPVSTVQLPERCYSMDVMYPLMVVGTA
ERHIQIFNLTNPTTPYRTQTSPLKWQTRVVSCFPSADGYAVGSIEGRVAIQYVEEAKSSQ
NFSFKCHRKDQSPTAKDQTLVFSVNDIVFHPVHGTFSTAGSDGTVNFWDKDARTRLKTFE
PVPGPISSTAFNRTGNIFAYAVSYDWSKGYTGMTPGHPNKIMLHACKEDEVKKRAARK
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgtccttctttcccactacatcgggtgcgacatccgctacgctcggtggaacggccgca
aacgaaccgaaagatgtggaagtctccgacccgcctagcgattcaatcagttcgctggcg
ttttcgactgctggagaataccttgctgtcggaagctggaataatgaagttcgaatttac
gaggtgaacccacaaggagggcaaactcaaggaaaagctatgtatacgcaccagggacct
gttcttggagtatgctggaacaaagaaggcaataaagtaatttcgtgcggtgccgacaac
gctgcgcgcatgtatgacttggctacgggccaaagctctcaggttgcgcagcacgatgcg
cctataaagtgtgtgaggtggattgagtcaccccagggcgggtttcttgctacgggtagc
tgggacaagactctgaagtattgggatactcgttcatcgacacctgtttcaactgttcaa
ctacccgagcgatgttactctatggacgtcatgtacccgttgatggtcgttggtactgcc
gagagacacattcagatattcaatcttacgaacccgactacaccttaccgaacacaaaca
tcaccacttaaatggcaaacacgtgtggttagctgcttcccttccgcagatggatatgcc
gtcgggagtattgaaggacgcgtggccatccagtacgtcgaagaagccaagtctagtcaa
aatttctcgtttaaatgccaccgtaaagatcagtctcctaccgcgaaggatcaaactctt
gtcttctcagtaaacgatatcgtattccaccccgtgcatggaaccttttccacggcaggg
tcggacggcacggtcaacttctgggacaaggacgcgcgaacgcggcttaagactttcgaa
ccggtccccggaccgatctcctcaacggcctttaaccgcacgggaaacatcttcgcctac
gcggtttcttacgactggtcgaagggatatactgggatgacacccggtcacccgaataaa
atcatgttgcatgcatgcaaggaagacgaggtgaagaagcgtgcggctaggaagtga

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