Fomitiporia mediterranea: FOMMEDRAFT_105006
Help
Entry
FOMMEDRAFT_105006 CDS
T03132
Name
(RefSeq) Nucleotidyltransferase
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
fme
Fomitiporia mediterranea
Pathway
fme03410
Base excision repair
fme03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FOMMEDRAFT_105006
03450 Non-homologous end-joining
FOMMEDRAFT_105006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fme03400
]
FOMMEDRAFT_105006
Enzymes [BR:
fme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FOMMEDRAFT_105006
DNA repair and recombination proteins [BR:
fme03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
FOMMEDRAFT_105006
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
FOMMEDRAFT_105006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
Cdd1
BRCT
NTP_transf_2
Motif
Other DBs
NCBI-GeneID:
18670065
NCBI-ProteinID:
XP_007264614
JGI:
Fomme1_105006
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MTPREYAIRVQSKFAAYLEKTSSEKLPLRGKAIFYIGGDYNTASQTTRKRMDLLRKKGAT
VVPTYDPNVITHIVTEGNARVTLKALGLKSLGQIPLHIPTLTWKWVSEGTPDSPEFWFAA
FSERIDASSDKTPDRLRDNRRTEPEPPPTAPVDQEFSRIEDFTIVDDKDERESDHASTSK
NRDDAGPAVAQPDNDPLAEFYDQARKDAATDRELSRTSDRSSDDNDDEPDTDNGRTKSKW
TCDNVPVGPGMCVNQDIVDKLSELEEINRTKISGDPREQRWRVFSYGKSIRAIRAHPKRI
RNYEDAIAIRGIGSKTAAKIVEIIKTGDLGRIKYDNTEDVQAIKLFNNIYGVGLSTAQKW
YSMGCRTLDDVKNRKGGITVSDVQEIGLKYYDDINTRIPRGEVEEIFNRVKLIALEIDPK
LFFLLMGSYRRGAKSCGDIDILMTRPTDDGRTHQGVLRRLLKELHLQGILTEDLAIPEDF
NDLEQTYRGLCRKDDKSPRRRIDILVVPYHERGGALIYYTGDDIFNRAIRLKAKSMGYSL
SQHGLATRVLRDHRGKKMVPADLVASETEEQIFHILGVPWQEPHERIRAMTS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaagagaatatgcaatacgggtgcaatcaaaatttgcagcttaccttgagaag
acatctagcgagaagctacctcttcgtggcaaagccatattctatattggcggagactat
aacacggcgtcgcagaccacgaggaagaggatggatcttctgcgcaagaaaggagccacc
gtcgttccgacatacgatcccaacgttatcactcacatagtgaccgaagggaatgcaaga
gtcactctgaaggcgctcgggttgaagtcactcggccaaatccccttgcacattcccaca
ttgacatggaaatgggtctcagaagggacgccagactcgccagaattctggttcgccgcc
ttctcagaacgaatagatgcttcgtcagataaaactcctgatcgtttgagggataatcga
cgcacggagcccgaacctccgccgacagctccggtggaccaggaatttagtcgcattgag
gattttacgatcgtagatgataaagatgaaagagaatctgaccatgcgtccacgtcaaag
aatcgggacgacgcagggcctgccgtggcgcagccggacaatgatccacttgcagaattt
tatgatcaagcccgaaaagatgcggcaaccgacagagagttatcgcgcactagcgaccga
agttccgacgacaacgacgacgaaccagacactgataatggaagaacaaaatctaaatgg
acttgtgataatgtaccagttggcccgggaatgtgtgtgaaccaagatatcgtagacaag
ctctcagagcttgaagaaatcaataggactaaaatatcgggggatcctcgggagcaacgt
tggagagtcttcagctatgggaaatcgatccgtgcaatcagggcgcatccaaagagaatt
cgaaattacgaggatgccatcgctattagaggcattggatcaaagactgcggcaaagatt
gtcgaaataatcaaaaccggtgatttgggacggataaaatacgacaataccgaagatgtc
caggcaatcaagctctttaataacatctacggcgtagggcttagtaccgcccagaagtgg
tacagcatgggatgtagaacgctcgacgatgtcaagaataggaaaggaggaataaccgtg
tccgatgtgcaagagattgggctcaagtattatgatgatattaatacgaggattcctcgc
ggcgaggtcgaagaaatcttcaacagagtaaaactcatagctttagaaatcgaccccaag
cttttctttctgttaatgggtagttatcgcaggggtgcgaagtcatgcggtgacatagac
attcttatgacgcggccgaccgacgatggccgaacacatcaaggagtgctccgtcgtcta
ttgaaagaactacatctacagggcattttaactgaggaccttgcgatcccagaagatttc
aatgatctagaacagacctacagagggctctgtcgcaaagatgacaagagccctaggcgc
cgtatcgatatacttgttgtcccttatcatgagaggggaggggcactaatttactacacg
ggcgatgacatttttaaccgggcaatccgcctaaaagccaaatctatgggatattctctg
agccagcatggattagccaccagggtgcttcgtgaccacagaggaaagaaaatggtacca
gccgaccttgtcgcatcggaaacagaagaacaaatttttcacattctaggtgtaccgtgg
caagagcctcatgagcgcatacgggcgatgacctcttag
DBGET
integrated database retrieval system
