Fomitiporia mediterranea: FOMMEDRAFT_106856
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Entry
FOMMEDRAFT_106856 CDS
T03132
Name
(RefSeq) RIC1-domain-containing protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fme04131
]
FOMMEDRAFT_106856
Membrane trafficking [BR:
fme04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
FOMMEDRAFT_106856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
18670229
NCBI-ProteinID:
XP_007265866
JGI:
Fomme1_106856
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MYFPTSAARQLSTMPSLPNLAPEPVIALSPSLNKALFCTLTKNGIAVWRARPSVVLAFLS
RTTTSLLEHGENVSAKWAPDGSRILIQTSKSYLVLVHLHYDGRPAMEPYQTPPLPSNAQR
HFQPGPGEALPMFSVSLSFEGVIRVDGDLLSVSPRRNCIMFSTKDPPSVQRIPWPTIDDD
FNDGNNDAEARRTLTGHDTWILNDYELPWLMNANVTVVQMSYSRAAKVETWITSDGRAYF
VQLVEKELSRESNSPQEPVTEEQQNRDSQSSEGSILQWQGVCIHDVEPPRWVQKQKAPAD
DSTDGEFDYIDSRRAVCVATNSKFSVVATGTQSGTVELASFPSFEGEMPKAQILSLPTLL
GRTKSGSVCAMEWSSDGYALAVGWKNGWAVWSIGGRCLAWGFGVEEDVDNERFRDIFMFG
VLDLFWGQGNFELFVVSQPSLNNPDGQLFVIPFAKSAVTEQQTPDNTRYAFLQLDDRVLV
YRGADQPDMSVINPESDVWQHIKIPLEYLASNWPIRYSAISMDGRLIAVAGRRGLIHFST
TSGRWKLFGDSVQEQAFAVRGGVLWFHHVLIAAVELSKAYQLRLYSRDLDLSNQNVLHRE
ILTSPVVTMSLVDNSLLVYTADNALSHYLIVPTAETIQLHFCGSITFDGVIAAPNAVRGL
SWMIPNAQKQLGDPMEDLAVATVLMMVGGKLVLLRPQKAGQQEVKYDMQILADRIEFCWI
HLSGIGTLENSLWGYDGRGIRIWLNALNLETPSGSATPPDSIEESVNIPLEFYPLSCLMD
KGILIGAEHEIAARPTLPFVLFRHTTSSHLFLHHILHAHLQSGEVGQAVSFAKHYENLVY
FAHSLEILLHTVVESEADLDNPSDTTVASAVLPKAVEFLDHFDAALDVVVGCARKTEMAR
WKYLFGIVGSPKVLFDKCLSLNKLKTAASYLLVLHNLEQLEDYKGAIVLLHRAQDDGDWQ
LCRELLRFLHSIDDSGSALREALDQTGILSVSSSESQETDHDASSSS
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcccgacatccgctgctcggcagctctcgactatgccgtcgttgcctaacctc
gctccggaacccgtgatcgcattgtctcccagcctcaacaaggctctcttttgtacgctt
acgaagaacgggattgctgtttggcgagctaggccctccgtggtccttgcttttttgtcg
agaacgaccacttcattgcttgagcatggagaaaatgtttccgctaaatgggccccggat
ggatcgagaatactgatacaaaccagcaaatcgtatttagttctcgttcatttacactac
gatggccgaccagcaatggaaccgtatcagactcctcccctgccttcgaacgctcaacga
cactttcagcccggtcctggagaggctctcccgatgttttcggtctctcttagcttcgaa
ggtgttattcgtgtggacggcgatctcttgagtgtctctcctcggaggaattgcattatg
ttctctaccaaggaccctccctccgtacaacgcataccttggccaacgatagatgacgat
ttcaacgacggcaataatgatgcagaagcaaggcggacactgacggggcacgacacgtgg
attctaaatgactatgagttgccttggttaatgaatgctaatgtgaccgttgttcagatg
tcatactcgcgagccgcgaaggtagagacgtggatcacatctgacggacgtgcatatttt
gttcagctggtcgagaaagaactcagccgagaaagcaatagcccccaggagcctgtgacg
gaggaacagcagaaccgggatagccagagctcagaaggctcaatattacaatggcaaggt
gtttgcattcacgacgtggaacctccacgatgggtccagaaacaaaaagctcctgcggat
gatagtactgacggcgaatttgactatattgattctcgacgggcagtttgtgtggcaacg
aactcgaaattctcagtagtggccaccggaacacagagcggtactgtggaactcgccagt
tttccttcatttgagggagaaatgcctaaggcacaaatcctgtcattaccaactttactt
gggcgtacaaagtcaggatctgtctgtgctatggaatggagctcggatggttatgctctt
gctgttggctggaagaatggttgggcggtgtggagtataggcggcagatgtctggcatgg
gggtttggtgtcgaggaggacgtagacaatgaaagattccgagatattttcatgttcgga
gtactggatcttttctggggacaagggaactttgagttattcgtagtgtcccagcccagc
ctaaataatccagatggacagctttttgttattcctttcgcaaaaagtgccgtgaccgaa
cagcaaacacccgataacacacgttacgcattcctacaattggacgatcgagtgctcgtt
tatcgtggcgctgatcagcctgacatgagtgttatcaatccagagtcggacgtttggcag
cacatcaagatccctctggaatatcttgcgtcgaattggcctatacgttattcagcgata
agcatggatggtcgtctcattgccgtcgcaggtcgacgggggctgatccacttcagcact
acgtctggccgatggaaactattcggtgacagtgtgcaggagcaagcgtttgcagtcagg
ggtggggtcctctggttccaccatgttttaatcgcggcggttgaattatcaaaagcatat
cagcttagactatattcccgagacctagaccttagtaaccaaaacgtccttcatagggaa
attctgacatcacctgttgttacaatgtcgctcgtcgataactccctgctcgtttacact
gctgataatgcgctgagccattatcttattgttccgacggcggagactatacaacttcac
ttttgtggcagtattacgtttgacggagtcattgctgcaccaaatgctgtcagaggccta
agttggatgattccaaatgcgcaaaagcagctcggagatccgatggaggaccttgctgtt
gcgactgtactcatgatggttggtgggaaactggtgcttctgcgtcctcaaaaggctggg
caacaggaggtaaagtacgatatgcaaatccttgcggatcgcatagaattttgttggata
caccttagtggtattggaacactcgaaaactcgttatggggatacgatggtcgaggcatt
cgaatatggcttaacgccctgaacctggagacaccatccggatccgctaccccgcctgac
tctattgaagaaagtgtcaatatacctctagagttctatccattgtcctgtctaatggac
aagggcatactgattggcgcagagcatgaaattgctgcgcgccctacacttccgttcgtt
ttgttcaggcatacaactagctcacatctcttcctccatcatatcttgcatgcgcatctt
cagtctggcgaagtaggacaagccgtttcttttgcaaagcattacgaaaacctggtgtac
tttgcccactctcttgaaattctcctccatactgtcgttgaatctgaagctgacctcgac
aacccatcggacactactgttgcatctgcagtcctaccaaaggcagttgaattcttggat
catttcgacgccgctctggatgtcgtcgtcggttgtgcccgtaaaactgagatggccagg
tggaagtacctttttggaattgttggtagtcctaaagtgctgttcgacaaatgcctctcc
ctaaacaaactcaagaccgctgcatcatatttactcgtactgcacaacctagaacaactg
gaagactacaaaggcgcgatcgttctcttgcatagagcacaggacgacggggattggcag
ttgtgtcgagaattgcttcggttccttcactccatcgatgacagtgggtccgctttgcgg
gaagccctcgaccagacgggtatcttatctgtatctagttctgaaagccaggagacggac
catgacgcaagttcaagctcttag
DBGET
integrated database retrieval system