Fomitiporia mediterranea: FOMMEDRAFT_107169
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Entry
FOMMEDRAFT_107169 CDS
T03132
Name
(RefSeq) Shwachman-Bodian-diamond syndrome protein
KO
K14574
ribosome maturation protein SDO1
Organism
fme
Fomitiporia mediterranea
Pathway
fme03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FOMMEDRAFT_107169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_107169
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
FOMMEDRAFT_107169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
Myo5a
GMT-wHTH
HEPN_MAE_28990
Motif
Other DBs
NCBI-GeneID:
18670254
NCBI-ProteinID:
XP_007266043
JGI:
Fomme1_107169
LinkDB
All DBs
Position
Unknown
AA seq
250 aa
AA seq
DB search
MPINQPSNQIKLTNVSVVRLKKGGKRFEVACYKNKVQEWRKGVETNLDDVLQISAVFVNV
SKGEQAKAGDLKKAFGKASEDDIIKEILKHGDLQVGEKEREHELTNLRKDIAHRVSESVV
DPSTQRPYSLGIIEKALSEVGFSVDPSKNAKSQVLGAIKLLQGGRLPVQRARMRVRLTIP
AADVEKLEARIREGAEVVEDTEERNELWEVTLQIDPAQFRVYKELLDKECKLGRLNVVDQ
TVFAPPPAAT
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgccgatcaaccaaccttcaaaccagatcaaattaaccaacgtgtccgtcgtgcgcctc
aagaagggcggaaagcgcttcgaagtggcatgctacaagaataaagtacaagaatggcgc
aagggcgtagaaacgaacctcgatgacgtccttcaaatcagcgccgtgttcgtgaacgtt
tccaagggcgaacaagccaaagcaggcgacctcaagaaagccttcgggaaggcttcagaa
gacgatatcatcaaagagatccttaaacatggagacctccaagtcggtgaaaaagaacgc
gaacacgagctcacaaatctccgcaaggacatcgcgcaccgagtctcagaatccgtcgtc
gatccatccacgcagcgtccttactctctcggcatcatcgagaaggctctatcggaagtc
gggtttagcgttgatccctctaagaatgcgaagagccaagtcttaggagctattaagtta
ctccagggcgggaggttaccagtgcaacgcgcgagaatgcgtgtacgcttgactatccct
gcggctgacgttgagaagcttgaggcgaggataagagaaggtgcggaggttgttgaggat
acagaggagagaaatgagttatgggaagttacgctgcaaattgaccctgctcagttccgc
gtgtacaaagagcttctagacaaggagtgcaaacttggtcgattaaacgtcgtcgatcaa
actgtcttcgcgcctcctcccgctgctacgtag
DBGET
integrated database retrieval system
