Fomitiporia mediterranea: FOMMEDRAFT_107561
Help
Entry
FOMMEDRAFT_107561 CDS
T03132
Name
(RefSeq) TPR-like protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fme03021
]
FOMMEDRAFT_107561
Transcription machinery [BR:
fme03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
FOMMEDRAFT_107561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_8
TPR_12
TPR_16
TPR_14
TPR_6
TPR_11
TPR_CcmH_CycH
TPR_7
TPR_Slam
ARM_TT21_N
TPR_9
TPR_10
HrpB1_HrpK
HemY_N
Motif
Other DBs
NCBI-GeneID:
18670284
NCBI-ProteinID:
XP_007266341
JGI:
Fomme1_107561
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MEGDDYGTPPPAPNRSIDVELSGQEIVAIDLDTLDPDPQDYIDLLLEAKSNATVSMWTRL
ACEYCKMGLYESAEKCLEAVVNEGGYPKSALTPADQLLANIQLARARKAPKIILENARQD
NLTKEHPKEFYHNKAARQLNLGQIDFSDSKYRFNTILIRGIFHLAKGDLDDAMKAFTLVI
NQKPTNIVALLGKARIAYARKQYPQALRTFQRVLELKPDALPDPRIGIGLCFWAMDQKVK
AKACWQRSLEVHPSNWSACLLLGLEAINSSKNPDDDDTERTESFIRGTKFCERAFKLNNR
NAAAANVLFDLFLQRGDKKVSLKLAERTIQFAETLALFSAGHIHAGRLAQMEGSSAGAMR
HFNAALKGNPKNVLAAIGLAQTQIKTDEMPAAIHTLDTLMQPPNPQRCLEATVLLASLRA
YPRPGFSSADAAQERQKARDLYEQVLKAMDLFDPAGLNGSGTRTRSKDEAYTHRKAISNF
GDDVELLVEAARLWQDENRPRMRRLLEEAVRVVQERVQAGGSPEPRLLNNLAVLKHNAGE
LAEARTMYEIALTEASSMEGAVGEGMATTVLYNLARVYEDQGETIIAKDAYDKLLGRHPE
YNDAKVRQAQLQVSLSRYDDAHEWLKSALSSQKSNLNLRSALSHFLISRQQIKLARDFTT
TTLKEGASHDVYSLCAAAWTFFNTARENRDPSPAGAADRRKHFIRAAEIYERALQFDPKC
AIAAQGLAIIVAEDALGPVKAPGVVIQDDAMRRVQGAREALDIFAKVRESMNDSSVYVNM
GHCYFVRDEFDRAIESYETAAKRASASGPDVTIIHCLCRAWYSKALKDQSFVALKSALSF
AQRALHLAPQEKASMYNLAMIEQKAAEMLLGTSPAKRSLADLKRVVEHGAHAQQLFASLA
ADKSPNVPYSREIADQRRKYGESILRRADEQVTAQEQHEAAQEARLAEARQKRLDEKRKA
AEAAELRAAQIEENAKKLAEERKKAREEVLEWTKNLNESDEDEKGKKSRKAKRQKVESIV
DSGDDAPANGEGKKKRKGKLKKEREANGGEGAGSDEEDEALFSGEDEDRPKKRVQKKRVV
RDDDDEEVAASAPRKKQFKSKETISDSDEELS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgacgactatggaactccaccgccagcgccgaataggtcaatagatgtcgaa
cttagcgggcaggagattgtcgccatcgatctcgacacgctcgacccagacccacaggat
tacatcgacttgcttctggaggcgaagagcaatgcgaccgtgtcgatgtggacgcgcctt
gcgtgtgaatactgtaagatgggtctgtacgaatctgcagagaagtgtcttgaagctgtc
gtcaatgagggtggttaccctaagtccgcgctgacaccagcggaccaacttttggccaat
atccaacttgcgcgtgcgaggaaggcgccgaaaataattctggaaaatgctcgccaggat
aatttgacgaaggaacaccctaaggaattttatcataacaaagctgctcggcagttgaat
ctcggtcagatcgacttcagtgattctaaatacaggtttaatactattcttattcgaggc
atctttcacctcgcgaaaggcgaccttgacgatgccatgaaggcttttacgcttgtgatc
aaccaaaaaccgaccaatattgtggctttgcttggtaaagcgcgtattgcgtatgcacgc
aagcagtacccgcaggcgcttcgaacgttccagcgagtgcttgagttgaagcctgacgca
ctacctgatccaagaattggaattgggttgtgcttctgggctatggaccagaaggtaaaa
gcgaaggcatgttggcagaggagcttggaagtgcatccttcgaattggtcagcgtgcctc
cttttgggactcgaagccatcaacagtagtaaaaatcctgatgatgacgatactgaaagg
acggagagcttcattcgaggcaccaagttctgcgagcgtgctttcaaattgaacaaccga
aacgcggctgcagcaaacgttctcttcgatttatttttacaaagaggcgacaagaaggtg
tccttgaagcttgctgagcgaacgattcagttcgccgagactctggcgttgttcagtgcg
ggtcatatacatgctggtcggcttgctcagatggaaggatcatcggcaggagcgatgcga
cactttaacgcagcgctaaaaggaaacccgaagaatgtgcttgcagctatcggtctcgcc
cagactcagatcaaaaccgatgagatgccggcagccatccacacgctcgacacattgatg
caaccaccaaatcctcagcgttgtctagaagccaccgttttgctcgcatcactcagagcg
tacccgcgaccgggtttctcttctgcagacgctgcgcaagaacgacaaaaagctcgtgat
ttgtacgagcaggttttgaaggcgatggacctgtttgatccagcggggttgaatggaagc
ggtacccggacgcgctcaaaggacgaggcttacacacatcgtaaagcgatctcaaacttt
ggggatgatgttgagttattggttgaggctgcgcgtttatggcaggacgagaaccggccg
cgaatgcgtcgattacttgaagaggctgttcgcgtcgtgcaggagcgagtacaagcagga
ggatcaccagaacctcgattactcaataacttagcggtactgaaacataatgccggcgaa
ctcgctgaagctcggacgatgtacgagattgcattgactgaggcgagctctatggagggt
gctgtaggtgagggtatggcgacgacggttctgtataatcttgcgcgagtgtatgaggat
cagggcgagacgattattgccaaagatgcgtatgataagctgctaggccggcatccggag
tacaatgatgccaaggtccggcaagcacagctacaggtatcactaagccgatacgacgat
gcacacgaatggctcaaatcggctttatcatcccaaaaatcaaaccttaacttacgttct
gcactgtcgcacttcttgatttcacgtcaacaaatcaaattagcgcgggacttcacaacg
acaacgcttaaggaaggtgcgagtcatgacgtatacagcctctgtgcagctgcctggact
ttcttcaacaccgctcgagagaatcgtgatccttcacctgctggtgcggctgaccgacga
aaacacttcatacgtgccgctgagatatacgaacgtgctttgcaatttgacccgaagtgc
gctatcgctgcgcaaggtcttgcaattatcgttgcggaagatgcgttgggtccggtaaag
gcgcctggcgtggttatccaggatgatgcgatgcggcgagtgcaaggtgcccgggaagcg
ttggatatttttgcgaaagtgagggagagcatgaatgactcgagcgtctatgtgaatatg
ggccattgttatttcgtaagggatgaatttgatagggcgatcgagagctacgagacagcc
gcgaaacgcgcctcggcgtctgggccggatgttactatcattcattgtctgtgtcgagcg
tggtactcgaaagctcttaaggaccagtcgtttgtagcactgaaaagtgcactctcgttc
gcgcaacgggcactgcatctcgctccgcaggagaaggccagcatgtataacttggcgatg
attgagcagaaggcagctgagatgcttcttggtacttcaccggcgaaaaggtcacttgcg
gacttgaagcgcgtggttgaacatggagcacatgctcaacaattgttcgcatcacttgca
gcagacaagtcacccaacgttccatatagccgcgaaatcgcagaccagcgacgaaagtat
ggcgaaagcatcctacgtcgcgcagatgagcaagtcaccgcacaagaacaacatgaagcg
gcacaagaagcccgactagccgaggcccgccaaaaacgtttggacgaaaagcgcaaagca
gctgaagctgcagagttgcgtgcagcgcagattgaggaaaatgcgaagaagctcgctgag
gagcggaagaaggctcgtgaggaggtgttggagtggacgaagaacttgaatgagagcgat
gaggatgagaaggggaagaagtcgaggaaggcgaagaggcagaaggtggagagtattgta
gatagtggggatgatgctccggcgaatggagaagggaagaagaagaggaagggtaagttg
aagaaggagagagaggcgaacggaggtgagggtgctggtagtgatgaagaggatgaagct
ctctttagtggcgaggatgaggaccggcctaagaagcgagtacaaaagaagcgtgttgtg
cgcgacgatgatgacgaagaggtcgccgcatctgcgccccgcaaaaaacaatttaaaagc
aaggagacaatttctgactctgacgaggaattatcatag
DBGET
integrated database retrieval system
