KEGG   Fomitiporia mediterranea: FOMMEDRAFT_108323
Entry
FOMMEDRAFT_108323 CDS       T03132                                 
Name
(RefSeq) WD40 repeat-like protein
  KO
K11805  DDB1- and CUL4-associated factor 7
Organism
fme  Fomitiporia mediterranea
Pathway
fme03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:fme00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    FOMMEDRAFT_108323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:fme04121]
    FOMMEDRAFT_108323
   03036 Chromosome and associated proteins [BR:fme03036]
    FOMMEDRAFT_108323
Ubiquitin system [BR:fme04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     FOMMEDRAFT_108323
Chromosome and associated proteins [BR:fme03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.3/1.5)
     FOMMEDRAFT_108323
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_TEP1_2nd WD40_CDC20-Fz WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_EIPR1 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML WD40_RFWD3 MIOS_WD40
Other DBs
NCBI-GeneID: 18670342
NCBI-ProteinID: XP_007266889
JGI: Fomme1_108323
LinkDB
Position
Unknown
AA seq 424 aa
MDWCKTPAPGQHSRPRTAFRLALGSFTEDSRNRLAIIGLQDERVLIEDDYDYEQHADFVS
LVEAHHGYPATSVQWQPATAATSGSGSAGSELLATSGDALRVWEYASDSTSAQGGTYVGM
KQASGVHRLTLKSTLSGSKVQQPGNTGAPITNFSWNEKSPSMIVTSSIDTTCTVWNIETA
SAVTQLIAHDREVYDVAWLPGSTDIFVSVGADGSLRAFDLRSLEHSTILYETPTPKPQSV
AAASAAAAGRPATAPLLRIAFNPADANYMSTFHIDSNDVQILDMRSPGQPVLELKAHKAP
INALGWGSADQPFLATAADDCQLLLWDITQQPARPPSQSARGPNSPRTSGTSTTASPSGS
SSSSSTKKAKVLTDPIYAYTAPAEIGNICWSPQIAGMTMASGHSTAPGEWLGITMGKSIK
ALKV
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggactggtgcaagaccccggcaccaggacagcactcgcgtccgcgaactgctttccgc
ctagctctcggttcattcacagaagattcacgaaatagactcgcgattatagggctacaa
gacgagcgagtgttgatcgaagatgactatgattacgagcagcatgcggatttcgtttcc
cttgtcgaggcacatcatggataccctgcgaccagcgtgcagtggcagcctgcaactgcg
gctacatcgggatcaggaagtgcagggtctgagctgcttgctacctccggtgatgccctt
cgtgtctgggagtatgcgagtgatagtactagtgcacagggtggtacatatgtcggcatg
aagcaggctagcggtgtgcaccgattaacacttaaaagtaccttatcggggtcaaaagtt
cagcaaccgggaaatactggtgctcccattaccaacttctcctggaatgaaaaatccccc
tcaatgatagtcacttcctcgattgatacaacatgcaccgtgtggaatatcgaaactgcg
agcgcagtaactcaactcatcgcacatgaccgtgaggtctacgatgtagcttggttacct
ggatcaacagatatctttgtctccgtcggtgcggacggttcactacgagcatttgactta
cgatcgttagagcattccacaattctgtacgaaacacccacaccgaagccacaaagcgtt
gctgccgcgagtgcagctgcagctggtcgaccggcaacagcacctttgctgcggatcgca
ttcaaccctgcagatgcgaattatatgagcacgttccatatcgactcaaatgacgtgcag
atactggatatgcgaagtccgggacaacctgtgctggagttgaaggcacataaagcaccg
attaatgccttaggatggggatcagctgatcagcctttccttgctacagcagcggacgac
tgccaacttcttctatgggacatcacacaacagcctgcacgacctccatctcagagcgct
cgtggcccgaattcacctcgcacgtcggggacgtccacgactgcctcacctagcggttca
tcgtcgtcttcatcaaccaagaaagcgaaagtcctaacagacccgatatacgcatacacc
gcacccgcggaaattggtaatatatgttggagtccgcagattgctgggatgacgatggca
tcgggccattcgactgcgcctggtgaatggctcggtatcacgatggggaagagtatcaaa
gctcttaaagtatga

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