Fomitiporia mediterranea: FOMMEDRAFT_108490
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Entry
FOMMEDRAFT_108490 CDS
T03132
Name
(RefSeq) NUC173-domain-containing protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fme03009
]
FOMMEDRAFT_108490
Ribosome biogenesis [BR:
fme03009
]
Eukaryotic type
90S particles
Other 90S particles
FOMMEDRAFT_108490
Pre-60S particles
Other pre-60S particles
FOMMEDRAFT_108490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
UTP20
Motif
Other DBs
NCBI-GeneID:
18670350
NCBI-ProteinID:
XP_007267018
JGI:
Fomme1_108490
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MYAQEMEEALSKIRPHTSSSLAHQKIPANLLTALEETFKEQNAERTPAAYFAGLLTTLES
TVQKEKETNYLLGDGDLLPAELYLLALIGPFVPAPVIRASLSNLLSLTSPLWTPLNPHAP
PLRSQLTWYNAVLRALDRTQLETQAVRQTFATILQLCLDPRPKVRKRAADIVRDVLASPP
SPLLRHPYSERVGEWSINALSEVNSLKQKGKKNANTDDVVNAAIHLLAFIRPVLPYLPSS
SLPAITTSLLSLPRLGNPFLSQSAYGVLSDLLSIPDDPDMPRNIDTSTSDLLQAILSSPP
LKTDIGLLPPWVQVVGKVMPVYASVDPEACTAELPRVWKTIFVFLESPDATTRRETAEAL
TRLTQCISPQFIEASLGNEKAALTQIITQLSKALDSIAFVRAIPELLNTVSALIFALRYR
PSGRGSPTAAERLLMSLLRKIADMRVKKGFEHKEAADDVLQTAMTVIGPEALLAALPLNL
EPDDRATGREPRAFLLPLLVQLHPSPLRHFISYFVPLTERMFDLQQRADAEDRAAEAKVW
SVLVSQVWNGLPAYCHQTPDLRESLTPQFAQMLSQLLYNQPELRPPVLKALKVIVESNTR
ASEGTAGDDSLSTEEAEQNLAFLKSQAESWFAVLFNVFSSVGRNEHAMVGDVISAWAAIT
DEKAMSKTCRKVVDMFKANLVKLPKATGSGSNTHLNASEDQRSTVATMQDILVLLVPYLS
QKDTRTVFELCLSPEVLKHKDNGVQKRAYKLLSKITSAGKIEIDAESLFAKMDEVAEDTL
SAAKKDRLTFLKALLPALPSNALHVIPAIIPEAVLGTKEPSEKARLAAFGLIVAMAYKMK
EGGVVKHAKLNGMDEDDLTEAPASLDEYLTMLAGGLAGASPHMISASVTAISRLIFEFKD
DISQEMHNEIFLTFLEYLRSANREIVKSTFGFVKLFIHTRPLDSLLPHLDALVPVLLRWS
HDHKNHFKEKVRHIFERLIRRCGWDAVYAAGGGGRDEEAAKVLTAIKKRKDRVKRRKAAR
RAAGEESDDEEAAPVRAVAEDAFEDVLYGSESDGDASDDELHANVEQKKGAKANNRGARL
RVDDDEPMDLLHGASTRVTNVRKAGRKPGADVSKFKTDGNTGKMVIESDSDNDAERIDED
ARMAGAAYRETLTSVDGFTRDQRGRVKFHKDTKKRRRDAEDGEENEDVEMVDVSAAVDAG
KNKKAKRRKPVKVGQEFKSKRAGGDVKKGGMDPYAYLPLSQAAKVGKGKGSHKVTVTGRR
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgtacgctcaagagatggaggaagcactctcaaaaatcaggcctcacacttcctcctcc
cttgctcaccaaaagatccctgccaatctcctcactgctctcgaggaaacatttaaagag
caaaatgccgaacgcacacccgctgcatacttcgctggattattgacaacgctggagagc
acagtgcaaaaggagaaggagacaaattatctattaggcgacggcgacttacttcccgcc
gaactctacctcctagcattgatcggtccattcgtccctgcaccggtaatacgagctagc
ctaagcaacctgctatcccttacctctccactgtggacacctttaaatccgcatgctcct
ccgcttcgatctcagctcacttggtataatgccgtcctacgtgctctggaccggacgcaa
ctcgaaactcaggccgttcgtcaaacatttgccaccattctccagctttgcttggatcca
aggccgaaagtgaggaaacgtgctgcagatatcgtacgagatgtacttgcatctccacct
agcccattattgcgacatccatattcggaacgagttggagaatggagcataaatgcactt
tcagaagtcaattcgctgaagcagaagggcaagaaaaatgcaaacactgacgacgttgtt
aatgccgccattcatctccttgcgttcatccgtcccgtcttaccttacctcccatcatcg
tcactacctgcgataacgacctctttattatcgcttcctcgtttaggcaatccgttccta
tctcaatccgcctatggagttttgtcagacctgctttccatccccgacgatcccgacatg
ccccgaaatatcgatacatcgacgtctgatttactacaagccatcctgagttctccgccg
ttgaaaacggatattggtctccttccgccttgggtacaggtcgtagggaaagtcatgccg
gtatatgcttccgtcgatcctgaagcttgtacagcagagcttccacgcgtttggaaaact
atcttcgttttcctcgagtctcccgatgcaactacgcgtcgagagactgcggaagcgctg
acacgccttacacagtgcatatctccgcaatttattgaagcatcgctcgggaatgagaaa
gctgcacttactcaaatcattacacagctgagcaaggcgcttgactcaatagcgtttgta
cgagcgattccagaattgctcaatacggtgtccgctctcatctttgcactacgttaccgt
ccgagtggacgagggtcaccgacagcagcagaacgtcttctcatgtcgcttctccggaaa
attgcggatatgcgtgtgaagaagggattcgagcataaggaagccgctgacgatgtgcta
caaacagctatgactgtgattggcccagaggctctcctcgctgctcttcctctgaacctc
gaaccagatgatcgagctaccggtcgtgaaccgcgggccttcctgctcccactcctcgtc
caactgcacccatccccgttacgccacttcatctcgtactttgttccactcacagagcgc
atgttcgacctgcaacagcgtgcggatgcagaggaccgtgctgcagaagcgaaggtatgg
agcgtcctggtctcgcaagtctggaatggtttacctgcgtattgccatcaaacaccggac
cttagagagtctttgacacctcaatttgcacaaatgctatcacagcttttatataaccaa
cccgaactccgtccgccagttctcaaggcactcaaagtcatcgtcgagagtaatactcga
gcgagtgaagggaccgcaggcgatgactctctttccacagaggaagcggaacaaaacctt
gcattccttaaatcccaggcagaaagctggttcgccgtgctctttaatgtctttagctcc
gtaggacgcaacgagcatgccatggtaggcgacgtgattagtgcctgggcagctataacg
gatgagaaggcaatgtcgaagacctgtcgaaaagtcgtcgacatgttcaaggccaatctc
gtgaagcttcctaaggcaactggctccggttcaaacacgcacttaaatgcaagcgaggat
caacgtagcactgtagccacgatgcaagacatccttgtcctgctcgtaccttacctttcg
cagaaggacacgcgaactgtctttgaattatgccttagcccggaggtcctgaagcacaaa
gacaacggagtgcagaagcgtgcatacaagcttctgagcaaaattacgagtgctggtaaa
attgagattgacgcagaaagcctgttcgcgaagatggacgaagttgcggaagatacgtta
tctgcggcgaaaaaggaccgccttactttcctcaaagctctccttccagcccttccatcc
aacgccttgcacgtcataccagcgatcattcccgaagccgtactaggtacgaaggagccg
tctgagaaggcccgactagctgcattcggcttgatagtcgcaatggcctataagatgaag
gaaggcggtgtggtaaagcacgcaaagctcaatggcatggatgaggacgaccttactgaa
gcgcctgcgagcctggacgagtacctcacgatgcttgccggtggtctcgctggagcgagt
cctcatatgattagtgcaagcgtcactgctatttcgcgtttgatcttcgagttcaaagat
gatatctctcaggaaatgcataacgaaatcttcctgacgttccttgaatatctcagatcc
gcgaaccgcgaaattgtcaagtcgacgtttggcttcgtgaagctgttcattcacactcgt
cctctcgattccctccttccacatctcgacgcactcgttccagtgctgcttcgctggtcg
catgaccacaagaatcacttcaaggagaaagtgcgacatattttcgagcgtcttataaga
cgatgtggctgggacgcagtttatgcggcgggtggaggagggagggatgaggaagcagcg
aaggttctgacagccatcaagaagcgaaaggaccgtgtcaagcgtagaaaggccgcccgt
cgcgcagcaggggaagaaagtgatgacgaggaagccgctccagtgcgtgccgtcgcggag
gatgcgtttgaagatgtcttatatggcagtgagagcgacggtgatgccagtgatgatgag
ttacatgcaaacgtggaacagaaaaagggagcaaaggccaataatagaggtgcccgacta
cgggttgacgacgatgagccgatggatctcttgcacggggccagtacacgcgtcacgaac
gtgcgaaaggcaggccgcaaacccggtgcagacgtatcaaagttcaaaacggatgggaac
acaggcaaaatggtcattgaatccgactcggataatgatgccgaacgaattgatgaagat
gctagaatggctggagcagcatatcgcgagacgctcacttcggtagatggcttcacgcgt
gaccaacgtgggcgtgtcaagttccacaaggatacgaagaagcgcagaagagacgcagag
gatggagaggagaatgaggatgttgagatggtagatgtcagcgcagcggtagatgcaggg
aaaaacaagaaagcgaagcgaagaaagcctgtcaaagtcggacaagaattcaagtcgaag
cgtgctggtggtgatgtcaagaagggcggaatggatccatatgcttatctcccgctttct
caagccgctaaagtgggaaagggcaaaggaagccataaagtgacggtcactggcagacgc
taa
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