Fomitiporia mediterranea: FOMMEDRAFT_108921
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Entry
FOMMEDRAFT_108921 CDS
T03132
Name
(RefSeq) WD40 repeat-like protein
KO
K10751
chromatin assembly factor 1 subunit B
Organism
fme
Fomitiporia mediterranea
Brite
KEGG Orthology (KO) [BR:
fme00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fme03036
]
FOMMEDRAFT_108921
Chromosome and associated proteins [BR:
fme03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
FOMMEDRAFT_108921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_Vps41
Beta-prop_WDR75_1st
B-prop_COPA_B_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
NBCH_WD40
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
18670382
NCBI-ProteinID:
XP_007267314
JGI:
Fomme1_108921
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MRVRTLEIRWHDSKPINSCDFQPAPSKKARPANERDFASQSYRLATAGEDNNVRSASASG
SSVQPTPHPPRVEYLSTLSKHHAPVNVVRFSPNGELIASAGDDGMVIVWSPSASAPNAAY
GSEPDEHSYEKEFWKARTPFRCSTMQVYDLAWSPTGEYIIAGSTDNTARIFNSVDGKCLR
EIAEHSHFVQGVAWDPLNEYIATQSSDRAVHVYNFSTKHGTFDMHAVGRNMKMNVRASRT
PSVGVGRKRPRSHRKESTASDAESAIASDRDEIYPPPPPVSMPIPMTPAPSIASTPSASG
PAFMPPPSERTMSRRSSFSSVAPGSPAPSHYSASHTGRSPSPMPPLPAIRAPPSPQLIAQ
SRLYGDESFTNFYRRLTFSPDGALLLTPSGHFEDPSNIASLMAGESSSRGRRGNPADSTL
TDPTSASSVFIYSRANFARPPIAQLPGHKKASVAVRFSPVLYDLRPGVTGAQAPPEPRTV
NVAVERGNSEQIDIDMVGPLPLSASAVSTSDPQSQGVKRPDSRSQSRVGPSPSPQTPHPS
QTLPSPALSAVDGPPQTPAQRSATPSTAGTSTSAGVQAQNTHQQTGSVFALPYRMLFAVA
TMDTITIHDTQQASPIALLTKLHYDEFTDMTWSPDGQCLMLTSRDGYCTIVIFDQILPAH
HTQQHALQLQSIALVHQHGHHTHHAHSHSQVSGSTSTSTHVTPLPTPAKRTAPLPPLDKP
VSSAGTSTSAPPESATSGTSVVSASSELATAQVSPATPEVQNTEPDNAKPASSTSVEPPK
KKRRVALTRVGDVDS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtccgcacgctcgagatacgatggcacgacagcaagccaattaactcgtgtgac
ttccagcccgcgccctcaaagaaggcgcgcccggcgaatgagagggacttcgcgtcccag
tcctacagacttgcaactgcgggcgaggacaacaatgtcagaagcgcgtccgcgtcgggg
tcgtccgtccagcctacgccgcacccgccgcgcgtcgagtacctctccactctttcaaaa
caccatgccccggttaacgtcgtacggtttagtccgaacggagaactgattgcttctgct
ggtgacgatggcatggtgatagtatggtcgccctcggcttcggcgccaaacgcggcgtac
ggctccgaaccggacgagcactcatacgagaaggagttctggaaggcacgtactccattt
cgatgctcgacaatgcaagtatatgatcttgcatggagtccaaccggggaatatattatc
gcgggaagcacggacaatacggcacgcatcttcaattctgtggatggaaagtgcttgcgt
gagattgccgagcacagtcatttcgtgcagggagtagcctgggatccgctcaacgagtac
attgcgacacaaagcagcgaccgcgctgtacatgtctataatttttcgacgaagcacggt
acctttgacatgcacgctgtgggacgaaatatgaagatgaatgtgagagctagcagaacg
cccagcgttggggttggtcggaagcgcccacgttcgcatcgcaaagaatcgactgcgagt
gacgcagagtcggcgattgcgtcagatagagacgaaatatacccaccaccgcctcctgtt
agtatgccaattccaatgacgcctgcgccttcgattgcaagcacaccatctgcttccggt
ccggccttcatgccgccaccgtctgaacggacaatgtcgagacgatcgtccttcagctcg
gttgcaccgggttcgccagccccctcgcattatagtgctagtcatacgggtcgttctccg
tctcctatgcctccactacctgccatccgcgcccctccaagtccacaactaattgctcaa
tcacgattatatggcgatgagagcttcacaaacttttatcgacggcttacatttagccct
gatggtgcgcttttgctgacaccttccgggcactttgaggacccgagcaacatcgcgtct
ctgatggcgggcgagtcttcgtcgcgtgggcggcgtgggaatcctgcggatagcacactc
accgacccaacgtccgcgtcgtcggtattcatttattcccgagctaactttgctcgtcca
ccgattgcacaacttcctggacataagaaagcgagcgttgcagtcaggttttctcctgtg
ttgtatgatttgcgccctggtgtaacgggtgcacaagcaccaccggaaccgcgaactgtg
aacgttgcggttgaacgtggaaatagcgaacagattgacatagacatggttggcccgttg
cctttatccgcttccgctgtatctacgagtgatccacagtcgcagggcgtgaagcgcccc
gattctcgtagtcaatcgcgtgttgggccttcaccgtctccgcagaccccgcatccttct
cagacgcttccttcaccggctctttctgctgtagatggaccgccgcaaactcctgcgcaa
aggtctgcaacaccgtcaacggctggaacgagtactagcgctggcgtgcaagcacagaac
acgcatcagcagactggttcagttttcgcattgccctacaggatgctgtttgcggtcgcg
actatggatacaattacgattcacgacacgcagcaggcgagccccatcgcgttgctgaca
aagttacattatgacgagttcactgatatgacttggtctccagatgggcagtgtctgatg
ttgacctctcgtgatggatactgcacaattgtgatattcgaccagatccttccagcacac
catacgcaacaacacgcactacaactgcagtcgattgcgttggtacatcagcatggacac
cacacccaccatgctcattcacactctcaagtatcaggctcgacctccacatcaacacat
gtgacacctttgccaacacctgcgaagcgcactgcaccgttaccgcctttggataagccc
gtttctagtgctgggacgagcacgagtgcgccacctgaatctgcgacctcaggaacgtca
gtagtttctgcgtccagtgagctagcaacagcgcaagtgtctcctgcaactccagaagtt
cagaatacggagcccgataatgctaaacctgcgagttcgacttcggtagagccaccgaag
aagaaacggagggttgcattgactcgcgtgggagacgtcgattcatga
DBGET
integrated database retrieval system